Package de.charite.compbio.jannovar.impl.parse
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Interface Summary Interface Description TranscriptParser General interface for transcript parsers. -
Class Summary Class Description FASTAParser Generic FASTA parser that allow record-wise loading of FASTA filesFASTARecord Representation of a FASTA recordReferenceDictParser Allows loading ofReferenceDictParser
from UCSC and RefSeq data.TranscriptSupportLevelsSetterFromLengths Set the transcript support level from transcript lengths. -
Exception Summary Exception Description InvalidAttributeException InvalidAttributeException
are thrown if a attribute given to a method is invalid and can not be processed.TranscriptParseException Exception that occurs during parsing of transcript database files.