Package de.charite.compbio.jannovar.mendel
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Class Summary Class Description Genotype Representation of a genotype in an individualGenotypeBuilder Helper class for buildingGenotype
objectsGenotypeCalls A list of genotypes (at an implicitely assumed site) in multiple individualsGenotypeCallsBuilder Helper class for buildingGenotypeCalls
objectsMendelianInheritanceChecker Facade class for checking lists ofGenotypeCalls
for compatibility with mendelian inheritance -
Enum Summary Enum Description ChromosomeType Describe the chromosome type, for use in mendelian inheritance filteringModeOfInheritance An enumeration of the main Mendelian modes of inheritance for prioritizing exome dataSubModeOfInheritance Enum for refined representation ofModeOfInheritance
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Exception Summary Exception Description IncompatiblePedigreeException Thrown when the pedigree does not fit to theGenotypeCalls