net.maizegenetics.pangenome net.maizegenetics.pangenome.Utils net.maizegenetics.pangenome.api net.maizegenetics.pangenome.db_loading net.maizegenetics.pangenome.fastaExtraction net.maizegenetics.pangenome.gui net.maizegenetics.pangenome.gvcfFiltering net.maizegenetics.pangenome.hapCalling net.maizegenetics.pangenome.hapcollapse net.maizegenetics.pangenome.multiSequenceAlignment net.maizegenetics.pangenome.pipelineTests net.maizegenetics.pangenome.processAssemblyGenomes net.maizegenetics.pangenome.smallseq net.maizegenetics.pangenome.trimAnchors