case class BasecallingParams(lane: Int, barcodeFile: FgBioDef.FilePath, libraryParamsFile: FgBioDef.FilePath, bams: Seq[FgBioDef.PathToBam]) extends Product with Serializable
A small class to store where the basecalling parameter and BAM files are located.
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Instance Constructors
- new BasecallingParams(lane: Int, barcodeFile: FgBioDef.FilePath, libraryParamsFile: FgBioDef.FilePath, bams: Seq[FgBioDef.PathToBam])
Value Members
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final
def
!=(arg0: Any): Boolean
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final
def
##(): Int
- Definition Classes
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def
+(other: String): String
- Implicit
- This member is added by an implicit conversion from BasecallingParams to any2stringadd[BasecallingParams] performed by method any2stringadd in scala.Predef.
- Definition Classes
- any2stringadd
-
def
->[B](y: B): (BasecallingParams, B)
- Implicit
- This member is added by an implicit conversion from BasecallingParams to ArrowAssoc[BasecallingParams] performed by method ArrowAssoc in scala.Predef.
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- @inline()
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final
def
==(arg0: Any): Boolean
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final
def
asInstanceOf[T0]: T0
- Definition Classes
- Any
- val bams: Seq[FgBioDef.PathToBam]
- val barcodeFile: FgBioDef.FilePath
-
def
clone(): AnyRef
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- protected[java.lang]
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- @throws( ... )
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def
ensuring(cond: (BasecallingParams) ⇒ Boolean, msg: ⇒ Any): BasecallingParams
- Implicit
- This member is added by an implicit conversion from BasecallingParams to Ensuring[BasecallingParams] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: (BasecallingParams) ⇒ Boolean): BasecallingParams
- Implicit
- This member is added by an implicit conversion from BasecallingParams to Ensuring[BasecallingParams] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: Boolean, msg: ⇒ Any): BasecallingParams
- Implicit
- This member is added by an implicit conversion from BasecallingParams to Ensuring[BasecallingParams] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: Boolean): BasecallingParams
- Implicit
- This member is added by an implicit conversion from BasecallingParams to Ensuring[BasecallingParams] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
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final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
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def
finalize(): Unit
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- protected[java.lang]
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- @throws( classOf[java.lang.Throwable] )
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def
formatted(fmtstr: String): String
- Implicit
- This member is added by an implicit conversion from BasecallingParams to StringFormat[BasecallingParams] performed by method StringFormat in scala.Predef.
- Definition Classes
- StringFormat
- Annotations
- @inline()
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final
def
getClass(): Class[_]
- Definition Classes
- AnyRef → Any
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final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
- val lane: Int
- val libraryParamsFile: FgBioDef.FilePath
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final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
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final
def
notify(): Unit
- Definition Classes
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final
def
notifyAll(): Unit
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final
def
synchronized[T0](arg0: ⇒ T0): T0
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final
def
wait(): Unit
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final
def
wait(arg0: Long, arg1: Int): Unit
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final
def
wait(arg0: Long): Unit
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def
→[B](y: B): (BasecallingParams, B)
- Implicit
- This member is added by an implicit conversion from BasecallingParams to ArrowAssoc[BasecallingParams] performed by method ArrowAssoc in scala.Predef.
- Definition Classes
- ArrowAssoc