Class/Object

nl.biopet.utils.ngs.ped

PedigreeFile

Related Docs: object PedigreeFile | package ped

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case class PedigreeFile(samples: Map[String, PedigreeSample]) extends Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, AnyRef, Any
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Inherited
  1. PedigreeFile
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. AnyRef
  7. Any
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new PedigreeFile(s: List[PedigreeSample])

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  2. new PedigreeFile(samples: Map[String, PedigreeSample])

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. def +(other: PedigreeFile): PedigreeFile

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  4. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  5. def apply(id: String): PedigreeSample

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  6. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  7. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  8. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  9. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  10. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  11. def groupByFamilies: Map[String, List[PedigreeSample]]

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  12. def groupByPhenotype: Map[Phenotype.Value, List[PedigreeSample]]

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  13. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  14. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  15. final def notify(): Unit

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    Definition Classes
    AnyRef

  16. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  17. val samples: Map[String, PedigreeSample]

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  18. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  19. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  20. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  21. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  22. def writeToFile(file: File): Unit

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Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

Ungrouped