public interface SAMFileWriter
extends java.io.Closeable
Modifier and Type | Method and Description |
---|---|
void |
addAlignment(SAMRecord alignment) |
void |
close()
Must be called to flush or file will likely be defective.
|
SAMFileHeader |
getFileHeader() |
void |
setProgressLogger(ProgressLoggerInterface progress)
Sets a ProgressLogger on this writer.
|
void addAlignment(SAMRecord alignment)
SAMFileHeader getFileHeader()
void setProgressLogger(ProgressLoggerInterface progress)
void close()
close
in interface java.lang.AutoCloseable
close
in interface java.io.Closeable