Class DataSeriesReader<T>
java.lang.Object
htsjdk.samtools.cram.encoding.reader.DataSeriesReader<T>
- Type Parameters:
T
- data type of the series to be read.
A CRAM Data Series reader for a particular (Encoding, DataSeriesType) and associated parameters
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Constructor Summary
ConstructorDescriptionDataSeriesReader
(DataSeriesType valueType, EncodingDescriptor encodingDescriptor, SliceBlocksReadStreams sliceBlocksReadStreams) Initialize a Data Series reader -
Method Summary
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Constructor Details
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DataSeriesReader
public DataSeriesReader(DataSeriesType valueType, EncodingDescriptor encodingDescriptor, SliceBlocksReadStreams sliceBlocksReadStreams) Initialize a Data Series reader- Parameters:
valueType
- type of the data to readencodingDescriptor
- encoding-specific parameterssliceBlocksReadStreams
- each DataSeries object uses its encoding descriptor/id to choose the stream to consume from amongst the various streams in the SliceBlocksReadStreams
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