Class Hierarchy
- java.lang.Object
- htsjdk.beta.io.bundle.Bundle (implements java.lang.Iterable<T>, java.io.Serializable)
- htsjdk.beta.plugin.reads.ReadsBundle<T> (implements java.io.Serializable)
- htsjdk.beta.plugin.reads.ReadsDecoderOptions (implements htsjdk.beta.plugin.HtsDecoderOptions)
- htsjdk.beta.plugin.reads.ReadsEncoderOptions (implements htsjdk.beta.plugin.HtsEncoderOptions)
- htsjdk.beta.plugin.reads.ReadsFormats
- htsjdk.beta.io.bundle.Bundle (implements java.lang.Iterable<T>, java.io.Serializable)
Interface Hierarchy
- java.lang.AutoCloseable
- java.io.Closeable
- htsjdk.beta.plugin.HtsDecoder<H,
R> (also extends htsjdk.beta.plugin.interval.HtsQuery<RECORD>) - htsjdk.beta.plugin.reads.ReadsDecoder (also extends htsjdk.beta.plugin.reads.ReadsQuery<R>)
- htsjdk.beta.plugin.HtsEncoder<H,
R> - htsjdk.beta.plugin.reads.ReadsEncoder
- htsjdk.beta.plugin.HtsDecoder<H,
- java.io.Closeable
- java.lang.Iterable<T>
- htsjdk.beta.plugin.interval.HtsQuery<RECORD>
- htsjdk.beta.plugin.HtsDecoder<H,
R> (also extends java.io.Closeable) - htsjdk.beta.plugin.reads.ReadsDecoder (also extends htsjdk.beta.plugin.reads.ReadsQuery<R>)
- htsjdk.beta.plugin.HtsDecoder<H,
- htsjdk.beta.plugin.interval.HtsQuery<RECORD>
- htsjdk.beta.plugin.reads.ReadsQuery<R>
- htsjdk.beta.plugin.reads.ReadsDecoder (also extends htsjdk.beta.plugin.HtsDecoder<H,
R>)
- htsjdk.beta.plugin.reads.ReadsDecoder (also extends htsjdk.beta.plugin.HtsDecoder<H,
- htsjdk.beta.plugin.Upgradeable
- htsjdk.beta.plugin.HtsCodec<D,
E> - htsjdk.beta.plugin.reads.ReadsCodec
- htsjdk.beta.plugin.HtsCodec<D,