Package htsjdk.samtools.cram.build
package htsjdk.samtools.cram.build
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ClassesClassDescriptionFactory for creating CRAM compression headers for containers when writing to a CRAM stream.Iterate over CRAM containers from an input stream, and unlike
CramContainerIteratoronly the header of each container is read, rather than the whole stream.An iterator of CRAM containers read from anInputStream.A collection of methods to read and write special values to/from CRAM files.Holds a region/fragment of a reference contig.An iterator of CRAM containers read from locations in aSeekableStream.Factory for creatingSlices when writing a CRAM stream.