Class Hierarchy
- java.lang.Object
- htsjdk.samtools.cram.structure.AlignmentContext
- htsjdk.samtools.cram.structure.AlignmentSpan
- htsjdk.samtools.cram.structure.CompressionHeader
- htsjdk.samtools.cram.structure.CompressionHeaderEncodingMap
- htsjdk.samtools.cram.structure.CompressorCache
- htsjdk.samtools.cram.structure.Container
- htsjdk.samtools.cram.structure.ContainerHeader
- htsjdk.samtools.cram.structure.CRAMCompressionRecord
- htsjdk.samtools.cram.structure.CRAMEncodingStrategy
- htsjdk.samtools.cram.structure.CramHeader
- htsjdk.samtools.cram.structure.CRAMRecordReadFeatures
- htsjdk.samtools.cram.structure.EncodingDescriptor
- htsjdk.samtools.cram.structure.ReadTag (implements java.lang.Comparable<T>)
- htsjdk.samtools.cram.structure.Slice
- htsjdk.samtools.cram.structure.SliceBlocks
- htsjdk.samtools.cram.structure.SliceBlocksReadStreams
- htsjdk.samtools.cram.structure.SliceBlocksWriteStreams
- htsjdk.samtools.cram.structure.SubstitutionMatrix
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- htsjdk.samtools.cram.structure.DataSeries
- htsjdk.samtools.cram.structure.DataSeriesType
- htsjdk.samtools.cram.structure.EncodingID
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)