Package htsjdk.samtools.seekablestream

Class ReadableSeekableStreamByteChannel

java.lang.Object

htsjdk.samtools.seekablestream.ReadableSeekableStreamByteChannel

All Implemented Interfaces:

Closeable, AutoCloseable, ByteChannel, Channel, ReadableByteChannel, SeekableByteChannel, WritableByteChannel

public class ReadableSeekableStreamByteChannel
extends Object
implements SeekableByteChannel

A class to wrap a SeekableStream in a read-only SeekableByteChannel.

Constructor Summary

Constructors

Constructor	Description
ReadableSeekableStreamByteChannel(SeekableStream seekableStream)

Method Summary

Modifier and Type	Method	Description
void	close()
boolean	isOpen()
long	position()
SeekableByteChannel	position(long newPosition)
int	read(ByteBuffer dst)
long	size()
SeekableByteChannel	truncate(long size)
int	write(ByteBuffer src)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ReadableSeekableStreamByteChannel

public ReadableSeekableStreamByteChannel(SeekableStream seekableStream)

Method Details

read

public int read(ByteBuffer dst)
         throws IOException

Specified by:

read in interface ReadableByteChannel

Specified by:

read in interface SeekableByteChannel

Throws:

IOException

write

public int write(ByteBuffer src)
          throws IOException

Specified by:

write in interface SeekableByteChannel

Specified by:

write in interface WritableByteChannel

Throws:

IOException

position

public long position()

Specified by:

position in interface SeekableByteChannel

position

public SeekableByteChannel position(long newPosition)
                             throws IOException

Specified by:

position in interface SeekableByteChannel

Throws:

IOException

size

public long size()

Specified by:

size in interface SeekableByteChannel

truncate

public SeekableByteChannel truncate(long size)

Specified by:

truncate in interface SeekableByteChannel

isOpen

public boolean isOpen()

Specified by:

isOpen in interface Channel

close

public void close()
           throws IOException

Specified by:

close in interface AutoCloseable

Specified by:

close in interface Channel

Specified by:

close in interface Closeable

Throws:

IOException