Package htsjdk.samtools.util.ftp

Class FTPStream

java.lang.Object

java.io.InputStream

java.io.FilterInputStream

htsjdk.samtools.util.ftp.FTPStream

All Implemented Interfaces:

Closeable, AutoCloseable

public class FTPStream
extends FilterInputStream

A "non-seekable" ftp stream. This one doesn't support random access. It is assumed that the ftp client has been connected, put in passive mode, set to binary, and otherwise prepped for reading before creating this stream.

Field Summary

Fields inherited from class java.io.FilterInputStream

in

Constructor Summary

Constructors

Constructor	Description
FTPStream(FTPClient ftp)

Method Summary

Modifier and Type	Method	Description
void	close()
int	read(byte[] bytes, int i, int i1)

Methods inherited from class java.io.FilterInputStream

available, mark, markSupported, read, read, reset, skip

Methods inherited from class java.io.InputStream

nullInputStream, readAllBytes, readNBytes, readNBytes, skipNBytes, transferTo

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

FTPStream

public FTPStream(FTPClient ftp)
          throws IOException

Throws:

IOException

Method Details

read

public int read(byte[] bytes,
 int i,
 int i1)
         throws IOException

Overrides:

read in class FilterInputStream

Throws:

IOException

close

public void close()
           throws IOException

Specified by:

close in interface AutoCloseable

Specified by:

close in interface Closeable

Overrides:

close in class FilterInputStream

Throws:

IOException