Package htsjdk.variant.variantcontext.filter

Class SnpFilter

java.lang.Object

htsjdk.variant.variantcontext.filter.SnpFilter

All Implemented Interfaces:

VariantContextFilter, Predicate<VariantContext>

public class SnpFilter
extends Object
implements VariantContextFilter

A Predicate on VariantContexts that returns true at sites that are SNPs

Constructor Summary

Constructors

Constructor	Description
SnpFilter()

Method Summary

Modifier and Type	Method	Description
boolean	test(VariantContext variantContext)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.function.Predicate

and, negate, or

Constructor Details

SnpFilter

public SnpFilter()

Method Details

test

public boolean test(VariantContext variantContext)

Specified by:

test in interface Predicate<VariantContext>

Parameters:

variantContext - the record to examine for being a SNP

Returns:

true if variantContext is a SNP