Class Hierarchy
- java.lang.Object
- htsjdk.variant.variantcontext.CommonInfo (implements java.io.Serializable)
- htsjdk.variant.variantcontext.Genotype (implements java.lang.Comparable<T>, java.io.Serializable)
- htsjdk.variant.variantcontext.FastGenotype
- htsjdk.variant.variantcontext.GenotypeBuilder
- htsjdk.variant.variantcontext.GenotypeJEXLContext
- htsjdk.variant.variantcontext.GenotypeLikelihoods
- htsjdk.variant.variantcontext.GenotypeLikelihoods.GenotypeLikelihoodsAllelePair
- htsjdk.variant.variantcontext.GenotypesContext (implements java.util.List<E>, java.io.Serializable)
- htsjdk.variant.variantcontext.LazyGenotypesContext
- htsjdk.variant.variantcontext.LazyGenotypesContext.LazyData
- htsjdk.variant.variantcontext.SimpleAllele (implements htsjdk.variant.variantcontext.Allele)
- htsjdk.variant.variantcontext.VariantContext (implements htsjdk.tribble.Feature, htsjdk.beta.plugin.HtsRecord, java.io.Serializable)
- htsjdk.variant.variantcontext.VariantContextBuilder
- htsjdk.variant.variantcontext.VariantContextComparator (implements java.util.Comparator<T>, java.io.Serializable)
- htsjdk.variant.variantcontext.VariantContextUtils
- htsjdk.variant.variantcontext.VariantContextUtils.JexlVCMatchExp
Interface Hierarchy
- java.lang.Comparable<T>
- htsjdk.variant.variantcontext.Allele (also extends java.io.Serializable)
- htsjdk.variant.variantcontext.LazyGenotypesContext.LazyParser
- java.io.Serializable
- htsjdk.variant.variantcontext.Allele (also extends java.lang.Comparable<T>)
Enum Class Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
- htsjdk.variant.variantcontext.GenotypeType
- htsjdk.variant.variantcontext.JexlMissingValueTreatment
- htsjdk.variant.variantcontext.StructuralVariantType
- htsjdk.variant.variantcontext.VariantContext.Type
- htsjdk.variant.variantcontext.VariantContext.Validation
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)