Package htsjdk.variant.variantcontext.writer

Class IntGenotypeFieldAccessors

java.lang.Object

htsjdk.variant.variantcontext.writer.IntGenotypeFieldAccessors

public class IntGenotypeFieldAccessors
extends Object

A convenient way to provide a single view on the many int and int[] field values we work with, for writing out the values. This class makes writing out the inline AD, GQ, PL, DP fields easy and fast

Since:

6/12

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	IntGenotypeFieldAccessors.Accessor
static class	IntGenotypeFieldAccessors.ADAccessor
static class	IntGenotypeFieldAccessors.DPAccessor
static class	IntGenotypeFieldAccessors.GQAccessor
static class	IntGenotypeFieldAccessors.PLAccessor

Constructor Summary

Constructors

Constructor	Description
IntGenotypeFieldAccessors()

Method Summary

Modifier and Type	Method	Description
IntGenotypeFieldAccessors.Accessor	getAccessor(String field)	Return an accessor for field, or null if none exists

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

IntGenotypeFieldAccessors

public IntGenotypeFieldAccessors()

Method Details

getAccessor

public IntGenotypeFieldAccessors.Accessor getAccessor(String field)

Return an accessor for field, or null if none exists

Parameters:

field -

Returns: