Package htsjdk.variant.vcf

Class VCFHeaderLineTranslator

java.lang.Object

htsjdk.variant.vcf.VCFHeaderLineTranslator

public class VCFHeaderLineTranslator
extends Object

A class for translating between vcf header versions

Constructor Summary

Constructors

Constructor	Description
VCFHeaderLineTranslator()

Method Summary

Modifier and Type	Method	Description
static Map<String,String>	parseLine(VCFHeaderVersion version, String valueLine, List<String> expectedTagOrder)
static Map<String,String>	parseLine(VCFHeaderVersion version, String valueLine, List<String> expectedTagOrder, List<String> recommendedTags)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

VCFHeaderLineTranslator

public VCFHeaderLineTranslator()

Method Details

parseLine

public static Map<String,String> parseLine(VCFHeaderVersion version,
 String valueLine,
 List<String> expectedTagOrder)

parseLine

public static Map<String,String> parseLine(VCFHeaderVersion version,
 String valueLine,
 List<String> expectedTagOrder,
 List<String> recommendedTags)