Package htsjdk.samtools.cram.compression.range

Class ByteModel

java.lang.Object

htsjdk.samtools.cram.compression.range.ByteModel

public class ByteModel
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
final int[]	frequencies
final int	maxSymbol
final int[]	symbols
int	totalFrequency

Constructor Summary

Constructors

Constructor	Description
ByteModel(int numSymbols)

Method Summary

Modifier and Type	Method	Description
int	modelDecode(ByteBuffer inBuffer, RangeCoder rangeCoder)
void	modelEncode(ByteBuffer outBuffer, RangeCoder rangeCoder, int symbol)
void	modelRenormalize()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

totalFrequency

public int totalFrequency

maxSymbol

public final int maxSymbol

symbols

public final int[] symbols

frequencies

public final int[] frequencies

Constructor Details

ByteModel

public ByteModel(int numSymbols)

Method Details

modelDecode

public int modelDecode(ByteBuffer inBuffer,
 RangeCoder rangeCoder)

modelRenormalize

public void modelRenormalize()

modelEncode

public void modelEncode(ByteBuffer outBuffer,
 RangeCoder rangeCoder,
 int symbol)