Hierarchy For All Packages
Package Hierarchies:- de.charite.compbio.jannovar.hgvs,
- de.charite.compbio.jannovar.hgvs.legacy,
- de.charite.compbio.jannovar.hgvs.nts,
- de.charite.compbio.jannovar.hgvs.nts.change,
- de.charite.compbio.jannovar.hgvs.nts.variant,
- de.charite.compbio.jannovar.hgvs.parser,
- de.charite.compbio.jannovar.hgvs.protein,
- de.charite.compbio.jannovar.hgvs.protein.change,
- de.charite.compbio.jannovar.hgvs.protein.variant
Class Hierarchy
- java.lang.Object
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParserBaseListener (implements de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParserListener)
- org.antlr.v4.runtime.DefaultErrorStrategy (implements org.antlr.v4.runtime.ANTLRErrorStrategy)
- de.charite.compbio.jannovar.hgvs.parser.HGVSErrorStrategy
- de.charite.compbio.jannovar.hgvs.parser.HGVSParser
- de.charite.compbio.jannovar.hgvs.HGVSVariant (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.nts.variant.NucleotideVariant
- de.charite.compbio.jannovar.hgvs.nts.variant.MultiAlleleNucleotideVariant
- de.charite.compbio.jannovar.hgvs.nts.variant.SingleAlleleNucleotideVariant
- de.charite.compbio.jannovar.hgvs.protein.variant.ProteinVariant
- de.charite.compbio.jannovar.hgvs.protein.variant.MultiAlleleProteinVariant
- de.charite.compbio.jannovar.hgvs.protein.variant.SingleAlleleProteinVariant
- de.charite.compbio.jannovar.hgvs.nts.variant.NucleotideVariant
- de.charite.compbio.jannovar.hgvs.legacy.LegacyChange
- de.charite.compbio.jannovar.hgvs.legacy.LegacyDeletion
- de.charite.compbio.jannovar.hgvs.legacy.LegacyIndel
- de.charite.compbio.jannovar.hgvs.legacy.LegacyInsertion
- de.charite.compbio.jannovar.hgvs.legacy.LegacySubstitution
- de.charite.compbio.jannovar.hgvs.parser.LegacyChangeParser
- de.charite.compbio.jannovar.hgvs.legacy.LegacyLocation
- de.charite.compbio.jannovar.hgvs.legacy.LegacyVariant
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideChange (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideDeletion
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideDuplication
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideIndel
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideInsertion
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideInversion
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideMiscChange
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideNotSequencedRepeat
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideSequencedRepeat
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideShortSequenceRepeatVariability
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideSubstitution
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideUnchanged
- de.charite.compbio.jannovar.hgvs.nts.variant.NucleotideChangeAllele (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString, java.util.List<E>)
- de.charite.compbio.jannovar.hgvs.nts.NucleotidePointLocation (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.nts.NucleotideRange (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideRepeatSequence (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.nts.NucleotideSeqDescription (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinChange (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinDeletion
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinDuplication
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinExtension
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinFrameshift
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinIndel
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinInsertion
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinMiscChange
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinShortSequenceRepeatVariability
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinSubstitution
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinUnchanged
- de.charite.compbio.jannovar.hgvs.protein.variant.ProteinChangeAllele (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString, java.util.List<E>)
- de.charite.compbio.jannovar.hgvs.protein.ProteinPointLocation (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.protein.ProteinRange (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- de.charite.compbio.jannovar.hgvs.protein.ProteinSeqDescription (implements de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString)
- org.antlr.v4.runtime.Recognizer<Symbol,ATNInterpreter>
- org.antlr.v4.runtime.Lexer (implements org.antlr.v4.runtime.TokenSource)
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSLexer
- de.charite.compbio.jannovar.hgvs.parser.HGVSLexer
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSLexer
- org.antlr.v4.runtime.Parser
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser
- org.antlr.v4.runtime.Lexer (implements org.antlr.v4.runtime.TokenSource)
- org.antlr.v4.runtime.RuleContext (implements org.antlr.v4.runtime.tree.RuleNode)
- org.antlr.v4.runtime.ParserRuleContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_deletionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_duplicationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_extensionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_frameshiftContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_indelContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_innerContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_insertionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_miscContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_ssrContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_substitutionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_change_unchangedContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_changeContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_charContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_multi_allele_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_multi_change_allele_innerContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_multi_change_alleleContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_point_locationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_rangeContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_single_allele_multi_change_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_single_allele_single_change_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_single_allele_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_stringContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Aa_var_sepContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Hgvs_variantContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_change_deletionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_change_indelContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_change_insertionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_change_substitutionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_changeContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_point_locationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Legacy_variantContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_base_locationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_deletionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_duplicationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_indelContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_innerContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_insertionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_inversionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_miscContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_not_sequenced_repeatContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_repeat_sequenceContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_sequenced_repeatContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_ssrContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_substitutionContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_change_unchangedContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_changeContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_multi_allele_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_multi_change_allele_innerContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_multi_change_alleleContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_numberContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_offsetContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_point_locationContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_rangeContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_single_allele_multi_change_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_single_allele_single_change_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_single_allele_varContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_stringContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.Nt_var_sepContext
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParser.ReferenceContext
- org.antlr.v4.runtime.ParserRuleContext
- java.lang.Throwable (implements java.io.Serializable)
- java.lang.Exception
- java.lang.RuntimeException
- de.charite.compbio.jannovar.hgvs.parser.HGVSParsingException
- java.lang.RuntimeException
- java.lang.Exception
- de.charite.compbio.jannovar.hgvs.Translator
Interface Hierarchy
- de.charite.compbio.jannovar.hgvs.ConvertibleToHGVSString
- org.antlr.v4.runtime.tree.ParseTreeListener
- de.charite.compbio.jannovar.hgvs.parser.Antlr4HGVSParserListener
Enum Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
- de.charite.compbio.jannovar.hgvs.AminoAcidCode
- de.charite.compbio.jannovar.hgvs.legacy.LegacyLocationType
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideMiscChangeType
- de.charite.compbio.jannovar.hgvs.nts.change.NucleotideNotSequencedRepeat.InDelType
- de.charite.compbio.jannovar.hgvs.protein.change.ProteinMiscChangeType
- de.charite.compbio.jannovar.hgvs.SequenceType
- de.charite.compbio.jannovar.hgvs.VariantConfiguration
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)