GenomeRegion (de.charite.compbio:jannovar-htsjdk 0.40 API)

java.lang.Object
- de.charite.compbio.jannovar.progress.GenomeRegion

```
public class GenomeRegion
extends Object
```
A region on a genome, can be a whole chromosome

Author:

Manuel Holtgrewe

Constructor Summary

Constructors
Constructor Description

GenomeRegion(String contig, int beginPos, int endPos)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean`	`equals(Object obj)`
`int`	`getBeginPos()`
`String`	`getContig()`
`int`	`getEndPos()`
`int`	`hashCode()`
`int`	`length()`
`String`	`toString()`

Methods inherited from class java.lang.Object
getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

GenomeRegion

public GenomeRegion(String contig,
                    int beginPos,
                    int endPos)

Method Detail

getContig
```
public String getContig()
```

getBeginPos
```
public int getBeginPos()
```

getEndPos
```
public int getEndPos()
```

length
```
public int length()
```

toString
```
public String toString()
```
Overrides:

toString in class Object

hashCode
```
public int hashCode()
```
Overrides:

hashCode in class Object

equals
```
public boolean equals(Object obj)
```
Overrides:

equals in class Object