GenomeRegionListFactoryFromSAMSequenceDictionary (de.charite.compbio:jannovar-htsjdk 0.40 API)

java.lang.Object
- de.charite.compbio.jannovar.progress.GenomeRegionListFactoryFromSAMSequenceDictionary

public class GenomeRegionListFactoryFromSAMSequenceDictionary
extends Object

Construct GenomeRegionList from a SAMSequenceDictionary

Author:: Manuel Holtgrewe

- Constructor Summary
  
  Constructors
  Constructor Description
  
  GenomeRegionListFactoryFromSAMSequenceDictionary()
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  GenomeRegionList construct(htsjdk.samtools.SAMSequenceDictionary seqDict)
  - Methods inherited from class java.lang.Object
    equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- GenomeRegionListFactoryFromSAMSequenceDictionary
```
public GenomeRegionListFactoryFromSAMSequenceDictionary()
```

Method Detail

construct

public GenomeRegionList construct(htsjdk.samtools.SAMSequenceDictionary seqDict)