Package io.github.rocsg.fijirelax.mrialgo

This package contains the data structure description (HyperMap), RiceEstimator functions, and utils for MR data handling Copyright (C) 2022 This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program. If not, see

Class Summary

Class	Description
HyperMap	HyperMap class is the data packager for the variety of possible data processed by FijiRelax.
MRUtils	This class is a utility class to hold many helpers used for simulating MRI echoes, computing rice noise estimation, reading information into TIFF metadata.
RiceEstimator	This class provides utilities to estimate MRI relaxation parameters in presence of a Rice noise Rice noise affects the signal in a way that make it complicated to invert : its moments depend on the value of the unaltered signal For more information, refer to Fernandez et al. 2022 FijiRelax: Fast and noise-corrected estimation of MRI relaxation maps in 3D + t (in prep.)

Enum Summary

Enum	Description
MRDataType	This enum define different common MRI imaging sequence.
NoiseManagement	This enum define cases of noise management.