- Loader
- IllegalAlchemistYAMLException
- AlchemistModelProvider
- EnvironmentAndExports
- GraphStreamSupport
- InitializedEnvironment
- LoadAlchemist
- PrintableVariable
- GeometricVariable
- NumericConstant
- Variable
- LinearVariable
- DependentVariable
- ArbitraryVariable
- Flag
- Constant
- JSR223Variable
- Abstract2DShape
- Circle
- Rectangle
- Filter
- Point
- Deployment
- Circle
- GeometricGradientRectangle
- Rectangle
- AbstractCloseTo
- AbstractRandomDeployment
- CircularArc
- CloseToAlreadyDeployed
- GraphStreamDeployment
- Grid
- Polygon
- SpecificPositions
- CommonFilters
- FilteringPolicy
- StatUtil
- Exporter
- Extractor
- AbstractExporter
- CSVExporter
- GlobalExporter
- MongoDBExporter
- MongoService
- ExecutionTime
- MeanSquaredError
- MoleculeReader
- NumberOfNodes
- Time
- CountDistinct
- And
- Not
- Or
- Xor
- OrderedParametersConstructor
- NamedParametersConstructor
- JVMConstructor
- YamlProvider
- CombinedLinkingRule
- OffsetGraphStreamLinkingRule