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- All Implemented Interfaces:
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com.google.protobuf.Message
,com.google.protobuf.MessageLite
,com.google.protobuf.MessageLiteOrBuilder
,com.google.protobuf.MessageOrBuilder
,java.io.Serializable
,net.maizegenetics.pangenome.io.Haplotypegraph.HaplotypeGraphProtoOrBuilder
public final class Haplotypegraph.HaplotypeGraphProto extends GeneratedMessageV3 implements Haplotypegraph.HaplotypeGraphProtoOrBuilder
Protobuf type
net.maizegenetics.pangenome.io.HaplotypeGraphProto
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Nested Class Summary
Nested Classes Modifier and Type Class Description public final class
Haplotypegraph.HaplotypeGraphProto.Builder
Protobuf type
net.maizegenetics.pangenome.io.HaplotypeGraphProto
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Field Summary
Fields Modifier and Type Field Description public final static int
REFERENCERANGES_FIELD_NUMBER
public final static int
HAPLOTYPENODES_FIELD_NUMBER
public final static int
HAPLOTYPEEDGES_FIELD_NUMBER
public final static int
GVCFIDTOFILE_FIELD_NUMBER
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Method Summary
Modifier and Type Method Description final static Descriptors.Descriptor
getDescriptor()
List<Haplotypegraph.ReferenceRangeProto>
getReferenceRangesList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
List<out Haplotypegraph.ReferenceRangeProtoOrBuilder>
getReferenceRangesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
int
getReferenceRangesCount()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProto
getReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProtoOrBuilder
getReferenceRangesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
List<Haplotypegraph.HaplotypeNodeProto>
getHaplotypeNodesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
List<out Haplotypegraph.HaplotypeNodeProtoOrBuilder>
getHaplotypeNodesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
int
getHaplotypeNodesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProto
getHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProtoOrBuilder
getHaplotypeNodesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
List<Haplotypegraph.HaplotypeEdgeProto>
getHaplotypeEdgesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
List<out Haplotypegraph.HaplotypeEdgeProtoOrBuilder>
getHaplotypeEdgesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
int
getHaplotypeEdgesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProto
getHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProtoOrBuilder
getHaplotypeEdgesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
List<Haplotypegraph.GVCFIDToFileProto>
getGvcfIdToFileList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
List<out Haplotypegraph.GVCFIDToFileProtoOrBuilder>
getGvcfIdToFileOrBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
int
getGvcfIdToFileCount()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProto
getGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProtoOrBuilder
getGvcfIdToFileOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
final boolean
isInitialized()
void
writeTo(CodedOutputStream output)
int
getSerializedSize()
boolean
equals(Object obj)
int
hashCode()
static Haplotypegraph.HaplotypeGraphProto
parseFrom(ByteBuffer data)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(ByteBuffer data, ExtensionRegistryLite extensionRegistry)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(ByteString data)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(ByteString data, ExtensionRegistryLite extensionRegistry)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(Array<byte> data)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(Array<byte> data, ExtensionRegistryLite extensionRegistry)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(InputStream input)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(InputStream input, ExtensionRegistryLite extensionRegistry)
static Haplotypegraph.HaplotypeGraphProto
parseDelimitedFrom(InputStream input)
static Haplotypegraph.HaplotypeGraphProto
parseDelimitedFrom(InputStream input, ExtensionRegistryLite extensionRegistry)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(CodedInputStream input)
static Haplotypegraph.HaplotypeGraphProto
parseFrom(CodedInputStream input, ExtensionRegistryLite extensionRegistry)
Haplotypegraph.HaplotypeGraphProto.Builder
newBuilderForType()
static Haplotypegraph.HaplotypeGraphProto.Builder
newBuilder()
static Haplotypegraph.HaplotypeGraphProto.Builder
newBuilder(Haplotypegraph.HaplotypeGraphProto prototype)
Haplotypegraph.HaplotypeGraphProto.Builder
toBuilder()
static Haplotypegraph.HaplotypeGraphProto
getDefaultInstance()
static Parser<Haplotypegraph.HaplotypeGraphProto>
parser()
Parser<Haplotypegraph.HaplotypeGraphProto>
getParserForType()
Haplotypegraph.HaplotypeGraphProto
getDefaultInstanceForType()
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Methods inherited from class com.google.protobuf.GeneratedMessageV3
getAllFields, getDescriptorForType, getField, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof
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Methods inherited from class com.google.protobuf.AbstractMessage
findInitializationErrors, getInitializationErrorString, toString
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Methods inherited from class com.google.protobuf.AbstractMessageLite
toByteArray, toByteString, writeDelimitedTo
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Methods inherited from class com.google.protobuf.Message
getParserForType
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Methods inherited from class com.google.protobuf.MessageLite
getParserForType
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Methods inherited from class com.google.protobuf.MessageLiteOrBuilder
getDefaultInstanceForType
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Method Detail
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getDescriptor
final static Descriptors.Descriptor getDescriptor()
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getReferenceRangesList
List<Haplotypegraph.ReferenceRangeProto> getReferenceRangesList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesOrBuilderList
List<out Haplotypegraph.ReferenceRangeProtoOrBuilder> getReferenceRangesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesCount
int getReferenceRangesCount()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRanges
Haplotypegraph.ReferenceRangeProto getReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesOrBuilder
Haplotypegraph.ReferenceRangeProtoOrBuilder getReferenceRangesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getHaplotypeNodesList
List<Haplotypegraph.HaplotypeNodeProto> getHaplotypeNodesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesOrBuilderList
List<out Haplotypegraph.HaplotypeNodeProtoOrBuilder> getHaplotypeNodesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesCount
int getHaplotypeNodesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodes
Haplotypegraph.HaplotypeNodeProto getHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesOrBuilder
Haplotypegraph.HaplotypeNodeProtoOrBuilder getHaplotypeNodesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeEdgesList
List<Haplotypegraph.HaplotypeEdgeProto> getHaplotypeEdgesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesOrBuilderList
List<out Haplotypegraph.HaplotypeEdgeProtoOrBuilder> getHaplotypeEdgesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesCount
int getHaplotypeEdgesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdges
Haplotypegraph.HaplotypeEdgeProto getHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesOrBuilder
Haplotypegraph.HaplotypeEdgeProtoOrBuilder getHaplotypeEdgesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getGvcfIdToFileList
List<Haplotypegraph.GVCFIDToFileProto> getGvcfIdToFileList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileOrBuilderList
List<out Haplotypegraph.GVCFIDToFileProtoOrBuilder> getGvcfIdToFileOrBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileCount
int getGvcfIdToFileCount()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFile
Haplotypegraph.GVCFIDToFileProto getGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileOrBuilder
Haplotypegraph.GVCFIDToFileProtoOrBuilder getGvcfIdToFileOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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isInitialized
final boolean isInitialized()
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writeTo
void writeTo(CodedOutputStream output)
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getSerializedSize
int getSerializedSize()
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hashCode
int hashCode()
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(ByteBuffer data)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(ByteBuffer data, ExtensionRegistryLite extensionRegistry)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(ByteString data)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(ByteString data, ExtensionRegistryLite extensionRegistry)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(Array<byte> data)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(Array<byte> data, ExtensionRegistryLite extensionRegistry)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(InputStream input)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(InputStream input, ExtensionRegistryLite extensionRegistry)
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parseDelimitedFrom
static Haplotypegraph.HaplotypeGraphProto parseDelimitedFrom(InputStream input)
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parseDelimitedFrom
static Haplotypegraph.HaplotypeGraphProto parseDelimitedFrom(InputStream input, ExtensionRegistryLite extensionRegistry)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(CodedInputStream input)
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parseFrom
static Haplotypegraph.HaplotypeGraphProto parseFrom(CodedInputStream input, ExtensionRegistryLite extensionRegistry)
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newBuilderForType
Haplotypegraph.HaplotypeGraphProto.Builder newBuilderForType()
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newBuilder
static Haplotypegraph.HaplotypeGraphProto.Builder newBuilder()
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newBuilder
static Haplotypegraph.HaplotypeGraphProto.Builder newBuilder(Haplotypegraph.HaplotypeGraphProto prototype)
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toBuilder
Haplotypegraph.HaplotypeGraphProto.Builder toBuilder()
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getDefaultInstance
static Haplotypegraph.HaplotypeGraphProto getDefaultInstance()
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parser
static Parser<Haplotypegraph.HaplotypeGraphProto> parser()
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getParserForType
Parser<Haplotypegraph.HaplotypeGraphProto> getParserForType()
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getDefaultInstanceForType
Haplotypegraph.HaplotypeGraphProto getDefaultInstanceForType()
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