Package 

Class CreateFastaDBFiles

  • All Implemented Interfaces:
    
public class CreateFastaDBFiles

    Simple one off command line tool to create the necessary files to upload fastas to the db. TODO create these files when you extract FASTA from GVCF. No need for this step. Created by zrm22 on 5/11/17.

    • Nested Class Summary

      Nested Classes 
      Modifier and Type Class Description

    • Field Summary

      Fields 
      Modifier and Type Field Description

    • Constructor Summary

      Constructors 
      Constructor Description

    • Enum Constant Summary

      Enum Constants 
      Enum Constant Description

    • Method Summary

      Modifier and Type Method Description
      static void main(Array<String> args)
      void createFiles(String taxaListFile, String outputFolder)
      void createInbredFiles(String taxaListFile, String outputFolder)

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait