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- All Implemented Interfaces:
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com.google.protobuf.Message.Builder
,com.google.protobuf.MessageLite.Builder
,com.google.protobuf.MessageLiteOrBuilder
,com.google.protobuf.MessageOrBuilder
,java.lang.Cloneable
,net.maizegenetics.pangenome.io.Haplotypegraph.HaplotypeGraphProtoOrBuilder
public final class Haplotypegraph.HaplotypeGraphProto.Builder extends GeneratedMessageV3.Builder<BuilderT> implements Haplotypegraph.HaplotypeGraphProtoOrBuilder
Protobuf type
net.maizegenetics.pangenome.io.HaplotypeGraphProto
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Method Summary
Modifier and Type Method Description final static Descriptors.Descriptor
getDescriptor()
Haplotypegraph.HaplotypeGraphProto.Builder
clear()
Descriptors.Descriptor
getDescriptorForType()
Haplotypegraph.HaplotypeGraphProto
getDefaultInstanceForType()
Haplotypegraph.HaplotypeGraphProto
build()
Haplotypegraph.HaplotypeGraphProto
buildPartial()
Haplotypegraph.HaplotypeGraphProto.Builder
mergeFrom(Message other)
Haplotypegraph.HaplotypeGraphProto.Builder
mergeFrom(Haplotypegraph.HaplotypeGraphProto other)
final boolean
isInitialized()
Haplotypegraph.HaplotypeGraphProto.Builder
mergeFrom(CodedInputStream input, ExtensionRegistryLite extensionRegistry)
List<Haplotypegraph.ReferenceRangeProto>
getReferenceRangesList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
int
getReferenceRangesCount()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProto
getReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
setReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
setReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
addReferenceRanges(Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
addReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
addReferenceRanges(Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
addReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
addAllReferenceRanges(Iterable<out Haplotypegraph.ReferenceRangeProto> values)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
clearReferenceRanges()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.HaplotypeGraphProto.Builder
removeReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProto.Builder
getReferenceRangesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProtoOrBuilder
getReferenceRangesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
List<out Haplotypegraph.ReferenceRangeProtoOrBuilder>
getReferenceRangesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProto.Builder
addReferenceRangesBuilder()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
Haplotypegraph.ReferenceRangeProto.Builder
addReferenceRangesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
List<Haplotypegraph.ReferenceRangeProto.Builder>
getReferenceRangesBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
List<Haplotypegraph.HaplotypeNodeProto>
getHaplotypeNodesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
int
getHaplotypeNodesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProto
getHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
setHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
setHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeNodes(Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeNodes(Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
addAllHaplotypeNodes(Iterable<out Haplotypegraph.HaplotypeNodeProto> values)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
clearHaplotypeNodes()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeGraphProto.Builder
removeHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProto.Builder
getHaplotypeNodesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProtoOrBuilder
getHaplotypeNodesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
List<out Haplotypegraph.HaplotypeNodeProtoOrBuilder>
getHaplotypeNodesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProto.Builder
addHaplotypeNodesBuilder()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
Haplotypegraph.HaplotypeNodeProto.Builder
addHaplotypeNodesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
List<Haplotypegraph.HaplotypeNodeProto.Builder>
getHaplotypeNodesBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
List<Haplotypegraph.HaplotypeEdgeProto>
getHaplotypeEdgesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
int
getHaplotypeEdgesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProto
getHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
setHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
setHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeEdges(Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeEdges(Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
addHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
addAllHaplotypeEdges(Iterable<out Haplotypegraph.HaplotypeEdgeProto> values)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
clearHaplotypeEdges()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeGraphProto.Builder
removeHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProto.Builder
getHaplotypeEdgesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProtoOrBuilder
getHaplotypeEdgesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
List<out Haplotypegraph.HaplotypeEdgeProtoOrBuilder>
getHaplotypeEdgesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProto.Builder
addHaplotypeEdgesBuilder()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
Haplotypegraph.HaplotypeEdgeProto.Builder
addHaplotypeEdgesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
List<Haplotypegraph.HaplotypeEdgeProto.Builder>
getHaplotypeEdgesBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
List<Haplotypegraph.GVCFIDToFileProto>
getGvcfIdToFileList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
int
getGvcfIdToFileCount()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProto
getGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
setGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
setGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
addGvcfIdToFile(Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
addGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
addGvcfIdToFile(Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
addGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
addAllGvcfIdToFile(Iterable<out Haplotypegraph.GVCFIDToFileProto> values)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
clearGvcfIdToFile()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.HaplotypeGraphProto.Builder
removeGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProto.Builder
getGvcfIdToFileBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProtoOrBuilder
getGvcfIdToFileOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
List<out Haplotypegraph.GVCFIDToFileProtoOrBuilder>
getGvcfIdToFileOrBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProto.Builder
addGvcfIdToFileBuilder()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
Haplotypegraph.GVCFIDToFileProto.Builder
addGvcfIdToFileBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
List<Haplotypegraph.GVCFIDToFileProto.Builder>
getGvcfIdToFileBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
final Haplotypegraph.HaplotypeGraphProto.Builder
setUnknownFields(UnknownFieldSet unknownFields)
final Haplotypegraph.HaplotypeGraphProto.Builder
mergeUnknownFields(UnknownFieldSet unknownFields)
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Methods inherited from class com.google.protobuf.GeneratedMessageV3.Builder
addRepeatedField, clearField, clearOneof, clone, getAllFields, getField, getFieldBuilder, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldBuilder, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof, newBuilderForField, setField, setRepeatedField
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Methods inherited from class com.google.protobuf.AbstractMessage.Builder
clear, clearOneof, clone, findInitializationErrors, getInitializationErrorString, mergeUnknownFields, toString
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Methods inherited from class com.google.protobuf.AbstractMessageLite.Builder
mergeDelimitedFrom
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Methods inherited from class com.google.protobuf.Message.Builder
addRepeatedField, clear, clearField, clearOneof, clone, mergeFrom, mergeUnknownFields, setField, setRepeatedField, setUnknownFields
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Methods inherited from class com.google.protobuf.MessageLite.Builder
build, buildPartial
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Methods inherited from class com.google.protobuf.MessageLiteOrBuilder
getDefaultInstanceForType
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Method Detail
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getDescriptor
final static Descriptors.Descriptor getDescriptor()
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getDescriptorForType
Descriptors.Descriptor getDescriptorForType()
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getDefaultInstanceForType
Haplotypegraph.HaplotypeGraphProto getDefaultInstanceForType()
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buildPartial
Haplotypegraph.HaplotypeGraphProto buildPartial()
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mergeFrom
Haplotypegraph.HaplotypeGraphProto.Builder mergeFrom(Message other)
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mergeFrom
Haplotypegraph.HaplotypeGraphProto.Builder mergeFrom(Haplotypegraph.HaplotypeGraphProto other)
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isInitialized
final boolean isInitialized()
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mergeFrom
Haplotypegraph.HaplotypeGraphProto.Builder mergeFrom(CodedInputStream input, ExtensionRegistryLite extensionRegistry)
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getReferenceRangesList
List<Haplotypegraph.ReferenceRangeProto> getReferenceRangesList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesCount
int getReferenceRangesCount()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRanges
Haplotypegraph.ReferenceRangeProto getReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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setReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder setReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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setReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder setReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder addReferenceRanges(Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder addReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto value)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder addReferenceRanges(Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder addReferenceRanges(int index, Haplotypegraph.ReferenceRangeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addAllReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder addAllReferenceRanges(Iterable<out Haplotypegraph.ReferenceRangeProto> values)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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clearReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder clearReferenceRanges()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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removeReferenceRanges
Haplotypegraph.HaplotypeGraphProto.Builder removeReferenceRanges(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesBuilder
Haplotypegraph.ReferenceRangeProto.Builder getReferenceRangesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesOrBuilder
Haplotypegraph.ReferenceRangeProtoOrBuilder getReferenceRangesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesOrBuilderList
List<out Haplotypegraph.ReferenceRangeProtoOrBuilder> getReferenceRangesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRangesBuilder
Haplotypegraph.ReferenceRangeProto.Builder addReferenceRangesBuilder()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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addReferenceRangesBuilder
Haplotypegraph.ReferenceRangeProto.Builder addReferenceRangesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getReferenceRangesBuilderList
List<Haplotypegraph.ReferenceRangeProto.Builder> getReferenceRangesBuilderList()
repeated .net.maizegenetics.pangenome.io.ReferenceRangeProto referenceRanges = 1;
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getHaplotypeNodesList
List<Haplotypegraph.HaplotypeNodeProto> getHaplotypeNodesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesCount
int getHaplotypeNodesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodes
Haplotypegraph.HaplotypeNodeProto getHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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setHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder setHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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setHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder setHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeNodes(Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeNodes(Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeNodes(int index, Haplotypegraph.HaplotypeNodeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addAllHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder addAllHaplotypeNodes(Iterable<out Haplotypegraph.HaplotypeNodeProto> values)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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clearHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder clearHaplotypeNodes()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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removeHaplotypeNodes
Haplotypegraph.HaplotypeGraphProto.Builder removeHaplotypeNodes(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesBuilder
Haplotypegraph.HaplotypeNodeProto.Builder getHaplotypeNodesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesOrBuilder
Haplotypegraph.HaplotypeNodeProtoOrBuilder getHaplotypeNodesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesOrBuilderList
List<out Haplotypegraph.HaplotypeNodeProtoOrBuilder> getHaplotypeNodesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodesBuilder
Haplotypegraph.HaplotypeNodeProto.Builder addHaplotypeNodesBuilder()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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addHaplotypeNodesBuilder
Haplotypegraph.HaplotypeNodeProto.Builder addHaplotypeNodesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeNodesBuilderList
List<Haplotypegraph.HaplotypeNodeProto.Builder> getHaplotypeNodesBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeNodeProto haplotypeNodes = 2;
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getHaplotypeEdgesList
List<Haplotypegraph.HaplotypeEdgeProto> getHaplotypeEdgesList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesCount
int getHaplotypeEdgesCount()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdges
Haplotypegraph.HaplotypeEdgeProto getHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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setHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder setHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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setHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder setHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeEdges(Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto value)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeEdges(Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder addHaplotypeEdges(int index, Haplotypegraph.HaplotypeEdgeProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addAllHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder addAllHaplotypeEdges(Iterable<out Haplotypegraph.HaplotypeEdgeProto> values)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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clearHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder clearHaplotypeEdges()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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removeHaplotypeEdges
Haplotypegraph.HaplotypeGraphProto.Builder removeHaplotypeEdges(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesBuilder
Haplotypegraph.HaplotypeEdgeProto.Builder getHaplotypeEdgesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesOrBuilder
Haplotypegraph.HaplotypeEdgeProtoOrBuilder getHaplotypeEdgesOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesOrBuilderList
List<out Haplotypegraph.HaplotypeEdgeProtoOrBuilder> getHaplotypeEdgesOrBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdgesBuilder
Haplotypegraph.HaplotypeEdgeProto.Builder addHaplotypeEdgesBuilder()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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addHaplotypeEdgesBuilder
Haplotypegraph.HaplotypeEdgeProto.Builder addHaplotypeEdgesBuilder(int index)
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getHaplotypeEdgesBuilderList
List<Haplotypegraph.HaplotypeEdgeProto.Builder> getHaplotypeEdgesBuilderList()
repeated .net.maizegenetics.pangenome.io.HaplotypeEdgeProto haplotypeEdges = 3;
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getGvcfIdToFileList
List<Haplotypegraph.GVCFIDToFileProto> getGvcfIdToFileList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileCount
int getGvcfIdToFileCount()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFile
Haplotypegraph.GVCFIDToFileProto getGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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setGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder setGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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setGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder setGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder addGvcfIdToFile(Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder addGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto value)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder addGvcfIdToFile(Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder addGvcfIdToFile(int index, Haplotypegraph.GVCFIDToFileProto.Builder builderForValue)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addAllGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder addAllGvcfIdToFile(Iterable<out Haplotypegraph.GVCFIDToFileProto> values)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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clearGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder clearGvcfIdToFile()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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removeGvcfIdToFile
Haplotypegraph.HaplotypeGraphProto.Builder removeGvcfIdToFile(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileBuilder
Haplotypegraph.GVCFIDToFileProto.Builder getGvcfIdToFileBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileOrBuilder
Haplotypegraph.GVCFIDToFileProtoOrBuilder getGvcfIdToFileOrBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileOrBuilderList
List<out Haplotypegraph.GVCFIDToFileProtoOrBuilder> getGvcfIdToFileOrBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFileBuilder
Haplotypegraph.GVCFIDToFileProto.Builder addGvcfIdToFileBuilder()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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addGvcfIdToFileBuilder
Haplotypegraph.GVCFIDToFileProto.Builder addGvcfIdToFileBuilder(int index)
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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getGvcfIdToFileBuilderList
List<Haplotypegraph.GVCFIDToFileProto.Builder> getGvcfIdToFileBuilderList()
repeated .net.maizegenetics.pangenome.io.GVCFIDToFileProto gvcfIdToFile = 4;
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setUnknownFields
final Haplotypegraph.HaplotypeGraphProto.Builder setUnknownFields(UnknownFieldSet unknownFields)
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mergeUnknownFields
final Haplotypegraph.HaplotypeGraphProto.Builder mergeUnknownFields(UnknownFieldSet unknownFields)
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