Package 

Class GVCFUtils

  • All Implemented Interfaces:
    
public class GVCFUtils

    Created by zrm22 on 9/6/17.

    • Nested Class Summary

      Nested Classes 
      Modifier and Type Class Description

    • Field Summary

      Fields 
      Modifier and Type Field Description

    • Constructor Summary

      Constructors 
      Constructor Description

    • Enum Constant Summary

      Enum Constants 
      Enum Constant Description

    • Method Summary

      Modifier and Type Method Description
      static List<VariantContext> convertVCFToGVCF(List<VariantContext> vcfVariantContexts)
      static boolean isReferenceRecord(VariantContext currentVC) Takes a VariantContext record and determines if the data is for a reference range block ro a variant.

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

    • Method Detail

      • isReferenceRecord

         static boolean isReferenceRecord(VariantContext currentVC)

        Takes a VariantContext record and determines if the data is for a reference range block ro a variant.