All Implemented Interfaces:: com.google.protobuf.MessageLiteOrBuilder , com.google.protobuf.MessageOrBuilder


public interface Haplotypegraph.HaplotypeNodeProtoOrBuilder
 implements MessageOrBuilder

Nested Class Summary

Nested Classes
Modifier and Type	Class	Description

Field Summary

Fields
Modifier and Type	Field	Description

Constructor Summary

Constructors
Constructor	Description

Enum Constant Summary

Enum Constants
Enum Constant	Description

Method Summary

Modifier and Type	Method	Description
`abstract int`	`getHapId()`	`int32 hapId = 1;`
`abstract boolean`	`hasHaplotypeSequence()`	`.net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;`
`abstract Haplotypegraph.HaplotypeSequenceProto`	`getHaplotypeSequence()`	`.net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;`
`abstract Haplotypegraph.HaplotypeSequenceProtoOrBuilder`	`getHaplotypeSequenceOrBuilder()`	`.net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;`
`abstract List<String>`	`getTaxaList()`	`repeated string taxa = 3;`
`abstract int`	`getTaxaCount()`	`repeated string taxa = 3;`
`abstract String`	`getTaxa(int index)`	`repeated string taxa = 3;`
`abstract ByteString`	`getTaxaBytes(int index)`	`repeated string taxa = 3;`
`abstract int`	`getGenomeFileId()`	`int32 genomeFileId = 4;`
`abstract int`	`getGvcfFileId()`	`int32 gvcfFileId = 5;`
`abstract String`	`getAsmContig()`	`string asmContig = 6;`
`abstract ByteString`	`getAsmContigBytes()`	`string asmContig = 6;`
`abstract int`	`getAsmStartCoordinate()`	`int32 asmStartCoordinate = 7;`
`abstract int`	`getAsmEndCoordinate()`	`int32 asmEndCoordinate = 8;`
`abstract String`	`getAsmStrand()`	`string asmStrand = 9;`
`abstract ByteString`	`getAsmStrandBytes()`	`string asmStrand = 9;`

Methods inherited from class com.google.protobuf.MessageOrBuilder
findInitializationErrors, getAllFields, getDefaultInstanceForType, getDescriptorForType, getField, getInitializationErrorString, getOneofFieldDescriptor, getRepeatedField, getRepeatedFieldCount, getUnknownFields, hasField, hasOneof
Methods inherited from class com.google.protobuf.MessageLiteOrBuilder
getDefaultInstanceForType, isInitialized
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
- Method Detail
  - getHapId
```
 abstract int getHapId()
```
    int32 hapId = 1;
  - hasHaplotypeSequence
```
 abstract boolean hasHaplotypeSequence()
```
    .net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;
  - getHaplotypeSequence
```
 abstract Haplotypegraph.HaplotypeSequenceProto getHaplotypeSequence()
```
    .net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;
  - getHaplotypeSequenceOrBuilder
```
 abstract Haplotypegraph.HaplotypeSequenceProtoOrBuilder getHaplotypeSequenceOrBuilder()
```
    .net.maizegenetics.pangenome.io.HaplotypeSequenceProto haplotypeSequence = 2;
  - getTaxaList
```
 abstract List<String> getTaxaList()
```
    repeated string taxa = 3;
  - getTaxaCount
```
 abstract int getTaxaCount()
```
    repeated string taxa = 3;
  - getTaxa
```
 abstract String getTaxa(int index)
```
    repeated string taxa = 3;
    
    Parameters:
    
    index - The index of the element to return.
  - getTaxaBytes
```
 abstract ByteString getTaxaBytes(int index)
```
    repeated string taxa = 3;
    
    Parameters:
    
    index - The index of the value to return.
  - getGenomeFileId
```
 abstract int getGenomeFileId()
```
    int32 genomeFileId = 4;
  - getGvcfFileId
```
 abstract int getGvcfFileId()
```
    int32 gvcfFileId = 5;
  - getAsmContig
```
 abstract String getAsmContig()
```
    string asmContig = 6;
  - getAsmContigBytes
```
 abstract ByteString getAsmContigBytes()
```
    string asmContig = 6;
  - getAsmStartCoordinate
```
 abstract int getAsmStartCoordinate()
```
    int32 asmStartCoordinate = 7;
  - getAsmEndCoordinate
```
 abstract int getAsmEndCoordinate()
```
    int32 asmEndCoordinate = 8;
  - getAsmStrand
```
 abstract String getAsmStrand()
```
    string asmStrand = 9;
  - getAsmStrandBytes
```
 abstract ByteString getAsmStrandBytes()
```
    string asmStrand = 9;

Interface Haplotypegraph.HaplotypeNodeProtoOrBuilder

Nested Class Summary

Field Summary

Constructor Summary

Enum Constant Summary

Method Summary

Methods inherited from class com.google.protobuf.MessageOrBuilder

Methods inherited from class com.google.protobuf.MessageLiteOrBuilder

Methods inherited from class java.lang.Object

Constructor Detail

Method Detail

getHapId

hasHaplotypeSequence

getHaplotypeSequence

getHaplotypeSequenceOrBuilder

getTaxaList

getTaxaCount

getTaxa

getTaxaBytes

getGenomeFileId

getGvcfFileId

getAsmContig

getAsmContigBytes

getAsmStartCoordinate

getAsmEndCoordinate

getAsmStrand

getAsmStrandBytes