Deprecated API

Contents

• Interfaces
• Fields
• Methods
• Constructors
• Enum Constants

Deprecated Interfaces

Interface	Description
org.semanticweb.owlapi.model.OWLLogicalEntity	this interface is redundant

Deprecated Fields

Field	Description
org.semanticweb.owlapi.search.Filters.annotations	use OWLAxiomIndex.annotationAssertionAxioms(org.semanticweb.owlapi.model.OWLAnnotationSubject) in place of this filter as it is much faster, thanks to indexing.

Deprecated Methods

Method	Description
org.obolibrary.obo2owl.OwlStringTools.translate(Collection<OWLAxiom>, OWLOntologyManager)	use OwlStringTools.translate(Collection)
org.semanticweb.owlapi.io.DocumentSources.getInputStream(IRI, OWLOntologyLoaderConfiguration)	use DocumentSources.getInputStream(IRI, OWLOntologyLoaderConfiguration, String) instead
org.semanticweb.owlapi.model.HasRemoveAxiom.removeAxiom(OWLOntology, OWLAxiom)	use OWLOntology.removeAxiom(OWLAxiom)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.containsAxiom(OWLAxiom, boolean)	use OWLAxiomCollection.containsAxiom(OWLAxiom, Imports, AxiomAnnotations)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.containsAxiomIgnoreAnnotations(OWLAxiom, boolean)	use OWLAxiomCollection.containsAxiom(OWLAxiom, Imports, AxiomAnnotations)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxiomCount(boolean)	use OWLAxiomCollection.getAxiomCount(Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxiomCount(AxiomType<T>, boolean)	use OWLAxiomCollection.getAxiomCount(AxiomType, Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(boolean)	use OWLAxiomCollection.axioms(Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(AxiomType<T>, boolean)	use OWLAxiomCollection.axioms(AxiomType, Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLAnnotationProperty, boolean)	use OWLAxiomCollection.axioms(OWLAnnotationProperty, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLClass, boolean)	use OWLAxiomCollection.axioms(OWLClass, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLDataProperty, boolean)	use OWLAxiomCollection.axioms(OWLDataProperty, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLDatatype, boolean)	use OWLAxiomCollection.axioms(OWLDatatype, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLIndividual, boolean)	use OWLAxiomCollection.axioms(OWLIndividual, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxioms(OWLObjectPropertyExpression, boolean)	use OWLAxiomCollection.axioms(OWLObjectPropertyExpression, Imports) instead
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getAxiomsIgnoreAnnotations(OWLAxiom, boolean)	use OWLAxiomCollection.axiomsIgnoreAnnotations(OWLAxiom, Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getLogicalAxiomCount(boolean)	use OWLAxiomCollection.getLogicalAxiomCount(Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getLogicalAxioms(boolean)	use OWLAxiomCollection.logicalAxioms(Imports)
org.semanticweb.owlapi.model.OWLAxiomCollectionBooleanArgs.getReferencingAxioms(OWLPrimitive, boolean)	use OWLAxiomCollection.referencingAxioms(OWLPrimitive, Imports)
org.semanticweb.owlapi.model.OWLHasValueRestriction.getValue()	use HasFiller.getFiller() instead
org.semanticweb.owlapi.model.OWLNaryClassAxiom.getClassExpressionsAsList()	use HasOperands.getOperandsAsList()
org.semanticweb.owlapi.model.OWLObjectPropertyExpression.getSimplified()	Since it is not legal to apply ObjectInverseOf to anything other than an Object Property, all object properties are always in the simplified form.
org.semanticweb.owlapi.model.OWLOntologyManager.addIRIMapper(OWLOntologyIRIMapper)	use getIRIMappers().add() instead
org.semanticweb.owlapi.model.OWLOntologyManager.addOntologyStorer(OWLStorerFactory)	use getOntologyStorers().add() instead
org.semanticweb.owlapi.model.OWLOntologyManager.clearIRIMappers()	use getIRIMappers().clear() instead
org.semanticweb.owlapi.model.OWLOntologyManager.clearOntologyStorers()	use getOntologyStorers().clear() instead
org.semanticweb.owlapi.model.OWLOntologyManager.getVersions(IRI)	use OWLOntologyManager.versions(IRI)
org.semanticweb.owlapi.model.OWLOntologyManager.removeIRIMapper(OWLOntologyIRIMapper)	use getIRIMappers().remove() instead
org.semanticweb.owlapi.model.OWLOntologyManager.removeOntologyStorer(OWLStorerFactory)	use getOntologyStorers().remove() instead
org.semanticweb.owlapi.model.OWLSignature.containsReference(OWLEntity)	use HasContainsEntityInSignature.containsEntityInSignature(OWLEntity)
org.semanticweb.owlapi.model.OWLSignature.containsReference(OWLEntity, Imports)	use OWLSignature.containsEntityInSignature(OWLEntity, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsAnnotationPropertyInSignature(IRI, boolean)	use OWLSignature.containsAnnotationPropertyInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsClassInSignature(IRI, boolean)	use OWLSignature.containsClassInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsDataPropertyInSignature(IRI, boolean)	use OWLSignature.containsDataPropertyInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsDatatypeInSignature(IRI, boolean)	use OWLSignature.containsDatatypeInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsEntityInSignature(IRI, boolean)	use OWLSignature.containsEntityInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsEntityInSignature(OWLEntity, boolean)	use OWLSignature.containsEntityInSignature(OWLEntity, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsIndividualInSignature(IRI, boolean)	use OWLSignature.containsIndividualInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsObjectPropertyInSignature(IRI, boolean)	use OWLSignature.containsObjectPropertyInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.containsReference(OWLEntity, boolean)	use OWLSignature.containsEntityInSignature(OWLEntity, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getAnnotationPropertiesInSignature(boolean)	use OWLSignature.annotationPropertiesInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getClassesInSignature(boolean)	use OWLSignature.classesInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getDataPropertiesInSignature(boolean)	use OWLSignature.dataPropertiesInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getDatatypesInSignature(boolean)	use OWLSignature.datatypesInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getEntitiesInSignature(IRI, boolean)	use OWLSignature.entitiesInSignature(IRI, Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getIndividualsInSignature(boolean)	use OWLSignature.individualsInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getObjectPropertiesInSignature(boolean)	use OWLSignature.objectPropertiesInSignature(Imports)
org.semanticweb.owlapi.model.OWLSignatureBooleanArgs.getReferencedAnonymousIndividuals(boolean)	use OWLSignature.referencedAnonymousIndividuals(Imports)
org.semanticweb.owlapi.model.OWLVisitorBase.getDefaultReturnValue(Object)	use #doDefault(Object) instead
org.semanticweb.owlapi.model.OWLVisitorBase.handleDefault(Object)	use #doDefault(Object) instead
org.semanticweb.owlapi.profiles.OWLProfileViolationVisitor.getDefaultReturnValue(OWLProfileViolation)	use #doDefault(Object) instead
org.semanticweb.owlapi.util.mansyntax.ManchesterOWLSyntaxParser.parseClassAxiom()	use ManchesterOWLSyntaxParser.parseAxiom(). parseClassAxiom() only casts the result of parseAxiom() to OWLClassAxiom.
org.semanticweb.owlapi.util.OWLAPIPreconditions.checkNotNull(Optional<T>, String)	use OWLAPIPreconditions.checkNotNull(Object, Supplier)

Deprecated Constructors

Constructor	Description
org.obolibrary.oboformat.model.Clause()	use Clause(String). Using this constructor makes the hashcode variable.

Deprecated Enum Constants

Enum Constant	Description
org.semanticweb.owlapi.vocab.SKOSVocabulary.COLLECTABLEPROPERTY	No longer used
org.semanticweb.owlapi.vocab.SKOSVocabulary.COMMENT	No longer used
org.semanticweb.owlapi.vocab.SKOSVocabulary.DOCUMENT	No longer used
org.semanticweb.owlapi.vocab.SKOSVocabulary.IMAGE	No longer used
org.semanticweb.owlapi.vocab.SKOSVocabulary.RESOURCE	No longer used