Package org.obolibrary.oboformat.parser

Class XrefExpander

java.lang.Object

org.obolibrary.oboformat.parser.XrefExpander

public class XrefExpander
extends Object

Xref expander.

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
class	XrefExpander.EquivalenceExpansion	Equivalence expansion.
class	XrefExpander.GenusDifferentiaExpansion	Genus diff expansion.
class	XrefExpander.HasSubClassExpansion	Subclass expansion.
class	XrefExpander.IsaExpansion	Is a expansion.
class	XrefExpander.RelationshipExpansion	Relationship expansion.
class	XrefExpander.ReverseGenusDifferentiaExpansion	Reverse genus differentia expansion.
class	XrefExpander.Rule	Rule.

Constructor Summary

Constructors

Constructor	Description
XrefExpander(OBODoc src)
XrefExpander(OBODoc src, String targetBase)
XrefExpander(OBODoc src, OBODoc tgt)

Method Summary

Modifier and Type	Method	Description
void	expandXrefs()	Expand xref list.
OBODoc	getTargetDoc(String idSpace)
final void	setUp()	Setup expander.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

XrefExpander

public XrefExpander(OBODoc src)

Parameters:

src - source document

XrefExpander

public XrefExpander(OBODoc src,
 String targetBase)

Parameters:

src - source document

targetBase - target base

XrefExpander

public XrefExpander(OBODoc src,
 OBODoc tgt)

Parameters:

src - source

tgt - target

Method Details

setUp

public final void setUp()

Setup expander.

getTargetDoc

public OBODoc getTargetDoc(String idSpace)

Parameters:

idSpace - id space

Returns:

target doc

expandXrefs

public void expandXrefs()

Expand xref list.