Class/Object

axle.bio

NeedlemanWunschMetricSpace

Related Docs: object NeedlemanWunschMetricSpace | package bio

Permalink

case class NeedlemanWunschMetricSpace[S, N, M, I, V](similarity: (N, N) ⇒ V, gapPenalty: V)(implicit evidence$32: Eq[N], evidence$33: Ring[I], evidence$34: Order[I], evidence$35: AdditiveMonoid[V], evidence$36: Order[V], la: LinearAlgebra[M, I, I, V], indexed: Indexed[S, I, N], finite: Finite[S, I], module: Module[V, I]) extends MetricSpace[S, V] with Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, MetricSpace[S, V], AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. NeedlemanWunschMetricSpace
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. MetricSpace
  7. AnyRef
  8. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Instance Constructors

  1. new NeedlemanWunschMetricSpace(similarity: (N, N) ⇒ V, gapPenalty: V)(implicit arg0: Eq[N], arg1: Ring[I], arg2: Order[I], arg3: AdditiveMonoid[V], arg4: Order[V], la: LinearAlgebra[M, I, I, V], indexed: Indexed[S, I, N], finite: Finite[S, I], module: Module[V, I])

    Permalink

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any
  5. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  6. def distance(s1: S, s2: S): V

    Permalink
    Definition Classes
    NeedlemanWunschMetricSpace → MetricSpace
  7. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  8. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  9. val gapPenalty: V

    Permalink
  10. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any
  11. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any
  12. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef
  13. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef
  14. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef
  15. val similarity: (N, N) ⇒ V

    Permalink
  16. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef
  17. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  18. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  19. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from MetricSpace[S, V]

Inherited from AnyRef

Inherited from Any

Ungrouped