package
java
Type Members
-
final
class
AlignmentRecordsToAlignmentRecordsConverter extends Function2[AlignmentRecordDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
final
class
AlignmentRecordsToCoverageConverter extends Function2[AlignmentRecordDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
AlignmentRecordsToFeaturesConverter extends Function2[AlignmentRecordDataset, RDD[Feature], FeatureDataset]
-
-
final
class
AlignmentRecordsToFragmentsConverter extends Function2[AlignmentRecordDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
AlignmentRecordsToGenotypesConverter extends Function2[AlignmentRecordDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
AlignmentRecordsToReadsConverter extends Function2[AlignmentRecordDataset, RDD[Read], ReadDataset]
-
-
final
class
AlignmentRecordsToSequencesConverter extends Function2[AlignmentRecordDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
AlignmentRecordsToSlicesConverter extends Function2[AlignmentRecordDataset, RDD[Slice], SliceDataset]
-
-
final
class
AlignmentRecordsToVariantContextConverter extends Function2[AlignmentRecordDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
AlignmentRecordsToVariantsConverter extends Function2[AlignmentRecordDataset, RDD[Variant], VariantDataset]
-
-
final
class
CoverageToAlignmentRecordsConverter extends Function2[CoverageDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
CoverageToCoverageConverter extends Function2[CoverageDataset, RDD[Coverage], CoverageDataset]
-
final
class
CoverageToFeaturesConverter extends Function2[CoverageDataset, RDD[Feature], FeatureDataset]
-
-
final
class
CoverageToFragmentsConverter extends Function2[CoverageDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
CoverageToGenotypesConverter extends Function2[CoverageDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
CoverageToReadsConverter extends Function2[CoverageDataset, RDD[Read], ReadDataset]
-
-
final
class
CoverageToSequencesConverter extends Function2[CoverageDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
CoverageToSlicesConverter extends Function2[CoverageDataset, RDD[Slice], SliceDataset]
-
-
final
class
CoverageToVariantContextConverter extends Function2[CoverageDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
CoverageToVariantsConverter extends Function2[CoverageDataset, RDD[Variant], VariantDataset]
-
-
final
class
FeaturesToAlignmentRecordsConverter extends Function2[FeatureDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
FeaturesToCoverageConverter extends Function2[FeatureDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
FeaturesToFeatureConverter extends Function2[FeatureDataset, RDD[Feature], FeatureDataset]
-
final
class
FeaturesToFragmentsConverter extends Function2[FeatureDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
FeaturesToGenotypesConverter extends Function2[FeatureDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
FeaturesToReadsConverter extends Function2[FeatureDataset, RDD[Read], ReadDataset]
-
-
final
class
FeaturesToSequencesConverter extends Function2[FeatureDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
FeaturesToSlicesConverter extends Function2[FeatureDataset, RDD[Slice], SliceDataset]
-
-
final
class
FeaturesToVariantContextConverter extends Function2[FeatureDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
FeaturesToVariantsConverter extends Function2[FeatureDataset, RDD[Variant], VariantDataset]
-
-
final
class
FragmentsToAlignmentRecordsConverter extends Function2[FragmentDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
FragmentsToCoverageConverter extends Function2[FragmentDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
FragmentsToFeaturesConverter extends Function2[FragmentDataset, RDD[Feature], FeatureDataset]
-
-
final
class
FragmentsToFragmentsConverter extends Function2[FragmentDataset, RDD[Fragment], FragmentDataset]
-
final
class
FragmentsToGenotypesConverter extends Function2[FragmentDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
FragmentsToReadsConverter extends Function2[FragmentDataset, RDD[Read], ReadDataset]
-
-
final
class
FragmentsToSequencesConverter extends Function2[FragmentDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
FragmentsToSlicesConverter extends Function2[FragmentDataset, RDD[Slice], SliceDataset]
-
-
final
class
FragmentsToVariantContextConverter extends Function2[FragmentDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
FragmentsToVariantsConverter extends Function2[FragmentDataset, RDD[Variant], VariantDataset]
-
-
final
class
GenotypesToAlignmentRecordsConverter extends Function2[GenotypeDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
GenotypesToCoverageConverter extends Function2[GenotypeDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
GenotypesToFeaturesConverter extends Function2[GenotypeDataset, RDD[Feature], FeatureDataset]
-
-
final
class
GenotypesToFragmentsConverter extends Function2[GenotypeDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
GenotypesToGenotypesConverter extends Function2[GenotypeDataset, RDD[Genotype], GenotypeDataset]
-
final
class
GenotypesToReadsConverter extends Function2[GenotypeDataset, RDD[Read], ReadDataset]
-
-
final
class
GenotypesToSequencesConverter extends Function2[GenotypeDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
GenotypesToSlicesConverter extends Function2[GenotypeDataset, RDD[Slice], SliceDataset]
-
-
final
class
GenotypesToVariantContextConverter extends Function2[GenotypeDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
GenotypesToVariantsConverter extends Function2[GenotypeDataset, RDD[Variant], VariantDataset]
-
-
-
final
class
ReadsToAlignmentRecordsConverter extends Function2[ReadDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
ReadsToCoverageConverter extends Function2[ReadDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
ReadsToFeaturesConverter extends Function2[ReadDataset, RDD[Feature], FeatureDataset]
-
-
final
class
ReadsToFragmentsConverter extends Function2[ReadDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
ReadsToGenotypesConverter extends Function2[ReadDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
ReadsToReadsConverter extends Function2[ReadDataset, RDD[Read], ReadDataset]
-
final
class
ReadsToSequencesConverter extends Function2[ReadDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
ReadsToSlicesConverter extends Function2[ReadDataset, RDD[Slice], SliceDataset]
-
-
final
class
ReadsToVariantContextsConverter extends Function2[ReadDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
ReadsToVariantsConverter extends Function2[ReadDataset, RDD[Variant], VariantDataset]
-
-
final
class
SequencesToAlignmentRecordsConverter extends Function2[SequenceDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
SequencesToCoverageConverter extends Function2[SequenceDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
SequencesToFeaturesConverter extends Function2[SequenceDataset, RDD[Feature], FeatureDataset]
-
-
final
class
SequencesToFragmentsConverter extends Function2[SequenceDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
SequencesToGenotypesConverter extends Function2[SequenceDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
SequencesToReadsConverter extends Function2[SequenceDataset, RDD[Read], ReadDataset]
-
-
final
class
SequencesToSequencesConverter extends Function2[SequenceDataset, RDD[Sequence], SequenceDataset]
-
final
class
SequencesToSlicesConverter extends Function2[SequenceDataset, RDD[Slice], SliceDataset]
-
-
final
class
SequencesToVariantContextsConverter extends Function2[SequenceDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
SequencesToVariantsConverter extends Function2[SequenceDataset, RDD[Variant], VariantDataset]
-
-
final
class
SlicesToAlignmentRecordsConverter extends Function2[SliceDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
SlicesToCoverageConverter extends Function2[SliceDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
SlicesToFeaturesConverter extends Function2[SliceDataset, RDD[Feature], FeatureDataset]
-
-
final
class
SlicesToFragmentsConverter extends Function2[SliceDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
SlicesToGenotypesConverter extends Function2[SliceDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
SlicesToReadsConverter extends Function2[SliceDataset, RDD[Read], ReadDataset]
-
-
final
class
SlicesToSequencesConverter extends Function2[SliceDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
SlicesToSlicesConverter extends Function2[SliceDataset, RDD[Slice], SliceDataset]
-
final
class
SlicesToVariantContextsConverter extends Function2[SliceDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
SlicesToVariantsConverter extends Function2[SliceDataset, RDD[Variant], VariantDataset]
-
-
trait
ToAlignmentRecordDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, AlignmentRecord, AlignmentRecord, AlignmentRecordDataset]
-
trait
ToCoverageDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Coverage, Coverage, CoverageDataset]
-
trait
ToFeatureDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Feature, Feature, FeatureDataset]
-
trait
ToFragmentDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Fragment, Fragment, FragmentDataset]
-
trait
ToGenotypeDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Genotype, Genotype, GenotypeDataset]
-
trait
ToReadDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Read, Read, ReadDataset]
-
trait
ToSequenceDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Sequence, Sequence, SequenceDataset]
-
trait
ToSliceDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Slice, Slice, SliceDataset]
-
trait
ToVariantContextDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, VariantContext, VariantContext, VariantContextDataset]
-
trait
ToVariantDatasetConversion[T, U <: Product, V <: GenomicDataset[T, U, V]] extends GenomicDatasetConversion[T, U, V, Variant, Variant, VariantDataset]
-
final
class
VariantContextsToAlignmentRecordsConverter extends Function2[VariantContextDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
final
class
VariantContextsToCoverageConverter extends Function2[VariantContextDataset, RDD[Coverage], CoverageDataset]
-
final
class
VariantContextsToFeaturesConverter extends Function2[VariantContextDataset, RDD[Feature], FeatureDataset]
-
final
class
VariantContextsToFragmentsConverter extends Function2[VariantContextDataset, RDD[Fragment], FragmentDataset]
-
final
class
VariantContextsToGenotypesConverter extends Function2[VariantContextDataset, RDD[Genotype], GenotypeDataset]
-
final
class
VariantContextsToReadsConverter extends Function2[VariantContextDataset, RDD[Read], ReadDataset]
-
final
class
VariantContextsToSequencesConverter extends Function2[VariantContextDataset, RDD[Sequence], SequenceDataset]
-
final
class
VariantContextsToSlicesConverter extends Function2[VariantContextDataset, RDD[Slice], SliceDataset]
-
final
class
VariantContextsToVariantContextConverter extends Function2[VariantContextDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
VariantContextsToVariantsConverter extends Function2[VariantContextDataset, RDD[Variant], VariantDataset]
-
final
class
VariantsToAlignmentRecordsConverter extends Function2[VariantDataset, RDD[AlignmentRecord], AlignmentRecordDataset]
-
-
final
class
VariantsToCoverageConverter extends Function2[VariantDataset, RDD[Coverage], CoverageDataset]
-
-
final
class
VariantsToFeaturesConverter extends Function2[VariantDataset, RDD[Feature], FeatureDataset]
-
-
final
class
VariantsToFragmentsConverter extends Function2[VariantDataset, RDD[Fragment], FragmentDataset]
-
-
final
class
VariantsToGenotypesConverter extends Function2[VariantDataset, RDD[Genotype], GenotypeDataset]
-
-
final
class
VariantsToReadsConverter extends Function2[VariantDataset, RDD[Read], ReadDataset]
-
-
final
class
VariantsToSequencesConverter extends Function2[VariantDataset, RDD[Sequence], SequenceDataset]
-
-
final
class
VariantsToSlicesConverter extends Function2[VariantDataset, RDD[Slice], SliceDataset]
-
-
final
class
VariantsToVariantContextConverter extends Function2[VariantDataset, RDD[VariantContext], VariantContextDataset]
-
final
class
VariantsToVariantsConverter extends Function2[VariantDataset, RDD[Variant], VariantDataset]
Value Members
-