ADAM2Fasta
cli
ADAM2FastaArgs
cli
ADAM2Fastq
cli
ADAM2FastqArgs
cli
ADAM2Vcf
cli
ADAM2VcfArgs
cli
ADAMMain
cli
ADAMModule
cli
About
cli
AlleleCount
cli
AlleleCountArgs
cli
AlleleCountHelper
cli
adam
bdgenomics
adamFile
ADAM2VcfArgs AlleleCountArgs
adamInputPath
CalculateDepthArgs
apply
ADAM2Fasta ADAM2Fastq ADAM2Vcf ADAMMain AlleleCount CalculateDepth CountContigKmers CountReadKmers Fasta2ADAM FlagStat Flatten Fragments2Reads ListDict MergeShards PrintADAM Reads2Coverage Reads2Fragments Transform TransformFeatures Vcf2ADAM VcfAnnotation2ADAM View WigFix2Bed
applyFilters
View
args
ADAM2Fasta ADAM2Fastq ADAM2Vcf AlleleCount CalculateDepth CountContigKmers CountReadKmers Fasta2ADAM FlagStat Flatten Fragments2Reads ListDict MergeShards PrintADAM Reads2Coverage Reads2Fragments Transform TransformFeatures Vcf2ADAM VcfAnnotation2ADAM View WigFix2Bed
artifactId
About
asSingleFile
Fragments2ReadsArgs Reads2CoverageArgs Reads2FragmentsArgs TransformArgs ViewArgs