org.bdgenomics.adam.cli

Adam2FastqArgs

class Adam2FastqArgs extends Args4jBase with ParquetLoadSaveArgs

Linear Supertypes
ParquetLoadSaveArgs, SaveFileArgs, LoadFileArgs, ParquetSaveArgs, SaveArgs, ParquetArgs, ParquetRDDArgs, Args4jBase, AnyRef, Any
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Inherited
  1. Adam2FastqArgs
  2. ParquetLoadSaveArgs
  3. SaveFileArgs
  4. LoadFileArgs
  5. ParquetSaveArgs
  6. SaveArgs
  7. ParquetArgs
  8. ParquetRDDArgs
  9. Args4jBase
  10. AnyRef
  11. Any
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Visibility
  1. Public
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Instance Constructors

  1. new Adam2FastqArgs()

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  7. var blockSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  8. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  9. var compressionCodec: CompressionCodecName

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  10. var disableDictionaryEncoding: Boolean

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  11. var disableProjection: Boolean

  12. var doPrintUsage: Boolean

    Definition Classes
    Args4jBase

  13. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  14. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  15. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  16. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  17. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  18. var inputPath: String

    Definition Classes
    LoadFileArgs

  19. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  20. var logLevel: String

    Definition Classes
    ParquetArgs

  21. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  22. final def notify(): Unit

    Definition Classes
    AnyRef

  23. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  24. var outputOriginalBaseQualities: Boolean

  25. var outputPath: String

    Definition Classes
    SaveFileArgs

  26. var outputPath2: String

  27. var pageSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  28. var persistLevel: String

  29. var printMetrics: Boolean

    Definition Classes
    Args4jBase

  30. var repartition: Int

  31. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  32. def toString(): String

    Definition Classes
    AnyRef → Any

  33. var validationStringency: ValidationStringency

  34. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  35. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  36. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from ParquetLoadSaveArgs

Inherited from SaveFileArgs

Inherited from LoadFileArgs

Inherited from ParquetSaveArgs

Inherited from SaveArgs

Inherited from ParquetArgs

Inherited from ParquetRDDArgs

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

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