org.bdgenomics.adam.cli

ViewArgs

class ViewArgs extends Args4jBase with ParquetArgs with ADAMSaveAnyArgs

Linear Supertypes
ADAMSaveAnyArgs, SaveArgs, ParquetArgs, ParquetRDDArgs, Args4jBase, AnyRef, Any
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. ViewArgs
  2. ADAMSaveAnyArgs
  3. SaveArgs
  4. ParquetArgs
  5. ParquetRDDArgs
  6. Args4jBase
  7. AnyRef
  8. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Instance Constructors

  1. new ViewArgs()

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  7. var asSingleFile: Boolean

    Definition Classes
    ViewArgs → ADAMSaveAnyArgs

  8. var blockSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  9. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  10. var compressionCodec: CompressionCodecName

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  11. var disableDictionaryEncoding: Boolean

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  12. var doPrintUsage: Boolean

    Definition Classes
    Args4jBase

  13. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  14. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  15. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  16. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  17. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  18. var inputPath: String

  19. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  20. var logLevel: String

    Definition Classes
    ParquetArgs

  21. var matchAllBits: Int

  22. var matchSomeBits: Int

  23. var mismatchAllBits: Int

  24. var mismatchSomeBits: Int

  25. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  26. final def notify(): Unit

    Definition Classes
    AnyRef

  27. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  28. var outputPath: String

    Definition Classes
    ViewArgs → SaveArgs

  29. var outputPathArg: String

  30. var pageSize: Int

    Definition Classes
    ParquetArgs → ParquetRDDArgs

  31. var printCount: Boolean

  32. var printMetrics: Boolean

    Definition Classes
    Args4jBase

  33. var sortFastqOutput: Boolean

    Definition Classes
    ViewArgs → ADAMSaveAnyArgs

  34. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  35. def toString(): String

    Definition Classes
    AnyRef → Any

  36. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  37. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  38. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from ADAMSaveAnyArgs

Inherited from SaveArgs

Inherited from ParquetArgs

Inherited from ParquetRDDArgs

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

Ungrouped