ADAM_2.11: Core 0.29.0 API

UNMAPPED

ReferencePosition

uCTag

DatasetBoundGenericGenomicDataset RDDBoundGenericGenomicDataset

uTag

DatasetBoundGenericGenomicDataset GenericGenomicDataset GenomicDataset RDDBoundGenericGenomicDataset CoverageDataset FeatureDataset FragmentDataset AlignmentRecordDataset ReadDataset SequenceDataset SliceDataset GenotypeDataset VariantContextDataset VariantDataset

unaligned

AlignmentRecordDataset

unclippedEnd

RichAlignmentRecord

unclippedStart

RichAlignmentRecord

union

ConsensusGenerator DatasetBoundGenericGenomicDataset GenomicDataset RDDBoundGenericGenomicDataset CoverageDataset FeatureDataset FragmentDataset AlignmentRecordDataset ReadDataset SequenceDataset SliceDataset GenotypeDataset VariantContextDataset VariantDataset

unpersist

DatasetBoundGenomicDataset GenomicDataset

unproductFn

GenericConverter GenericGenomicDataset GenomicDataset CoverageDataset FeatureDataset FragmentDataset AlignmentRecordDataset ReadDataset SequenceDataset SliceDataset GenotypeDataset VariantContextDataset VariantDataset

unstranded

ReferenceRegion

unstrandedDistance

ReferenceRegion

url

util