ReadGroup

Value Members

1. final def !=(arg0: Any): Boolean

   

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2. final def ##(): Int

   

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3. final def ==(arg0: Any): Boolean

   

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4. def apply(samRGR: SAMReadGroupRecord): ReadGroup

   

   Converts a SAMReadGroupRecord into a ReadGroup.

   Converts a SAMReadGroupRecord into a ReadGroup.

   samRGR

   SAMReadGroupRecord to convert.

   returns

   Returns an equivalent ADAM format read group.

5. final def asInstanceOf[T0]: T0

   

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6. def clone(): AnyRef

   

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7. final def eq(arg0: AnyRef): Boolean

   

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8. def equals(arg0: Any): Boolean

   

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9. def finalize(): Unit

   

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10. def fromAvro(readGroup: formats.avro.ReadGroup): ReadGroup

    

    Converts the Avro ReadGroup record into a model ReadGroup.

    Converts the Avro ReadGroup record into a model ReadGroup.

    Although the ReadGroup class is serializable, when saving the record to disk, we want to save it as Avro. This method allows us to go from the Avro format which we use on disk into the class we use in memory.

    readGroup

    ReadGroup record loaded from disk.

    returns

    Avro record converted into ReadGroup representation.

11. final def getClass(): Class[_]

    

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12. def hashCode(): Int

    

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13. final def isInstanceOf[T0]: Boolean

    

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14. final def ne(arg0: AnyRef): Boolean

    

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15. final def notify(): Unit

    

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16. final def notifyAll(): Unit

    

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17. final def synchronized[T0](arg0: ⇒ T0): T0

    

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18. def toString(): String

    

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19. final def wait(): Unit

    

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20. final def wait(arg0: Long, arg1: Int): Unit

    

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21. final def wait(arg0: Long): Unit

    

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