Object/Class

org.bdgenomics.adam.models

ReadGroupDictionary

Related Docs: class ReadGroupDictionary | package models

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object ReadGroupDictionary extends Serializable

Singleton object for creating dictionaries of read groups.

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Serializable, Serializable, AnyRef, Any
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  1. ReadGroupDictionary
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Value Members

  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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    Attributes
    protected[java.lang]
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    @throws( ... )

  6. def empty: ReadGroupDictionary

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    returns

    Returns a read group dictionary that contains no read groups.

  7. final def eq(arg0: AnyRef): Boolean

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  8. def equals(arg0: Any): Boolean

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  9. def finalize(): Unit

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    Attributes
    protected[java.lang]
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    @throws( classOf[java.lang.Throwable] )

  10. def fromSAMHeader(header: SAMFileHeader): ReadGroupDictionary

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    Builds a read group dictionary from a SAM file header.

    Builds a read group dictionary from a SAM file header.

    header

    SAM file header with attached read groups.

    returns

    Returns a new read group dictionary with the read groups attached to the file header.

  11. final def getClass(): Class[_]

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  12. def hashCode(): Int

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  13. final def isInstanceOf[T0]: Boolean

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  14. final def ne(arg0: AnyRef): Boolean

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  15. final def notify(): Unit

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  16. final def notifyAll(): Unit

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  17. final def synchronized[T0](arg0: ⇒ T0): T0

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  18. def toString(): String

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  19. final def wait(): Unit

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  20. final def wait(arg0: Long, arg1: Int): Unit

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  21. final def wait(arg0: Long): Unit

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Inherited from Serializable

Inherited from Serializable

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