ADAMContext

Value Members

1. final def !=(arg0: Any): Boolean

   

   Definition Classes

   AnyRef → Any

2. final def ##(): Int

   

   Definition Classes

   AnyRef → Any

3. final def ==(arg0: Any): Boolean

   

   Definition Classes

   AnyRef → Any

4. def ADAMContextFromSession(ss: SparkSession): ADAMContext

   

   Creates an ADAMContext from a SparkSession.

   Creates an ADAMContext from a SparkSession.

   ss

   SparkSession

   returns

   ADAMContext

5. implicit def AlignmentsToAlignmentsConversionFn(gDataset: AlignmentDataset, rdd: RDD[Alignment]): AlignmentDataset

   

6. implicit def AlignmentsToCoverageConversionFn(gDataset: AlignmentDataset, rdd: RDD[Coverage]): CoverageDataset

   

7. implicit def AlignmentsToCoverageDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Coverage]): CoverageDataset

   

8. implicit def AlignmentsToFeaturesConversionFn(gDataset: AlignmentDataset, rdd: RDD[Feature]): FeatureDataset

   

9. implicit def AlignmentsToFeaturesDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Feature]): FeatureDataset

   

10. implicit def AlignmentsToFragmentsConversionFn(gDataset: AlignmentDataset, rdd: RDD[Fragment]): FragmentDataset

    

11. implicit def AlignmentsToFragmentsDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Fragment]): FragmentDataset

    

12. implicit def AlignmentsToGenotypesConversionFn(gDataset: AlignmentDataset, rdd: RDD[Genotype]): GenotypeDataset

    

13. implicit def AlignmentsToGenotypesDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Genotype]): GenotypeDataset

    

14. implicit def AlignmentsToReadsConversionFn(gDataset: AlignmentDataset, rdd: RDD[Read]): ReadDataset

    

15. implicit def AlignmentsToReadsDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Read]): ReadDataset

    

16. implicit def AlignmentsToSequencesConversionFn(gDataset: AlignmentDataset, rdd: RDD[Sequence]): SequenceDataset

    

17. implicit def AlignmentsToSequencesDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Sequence]): SequenceDataset

    

18. implicit def AlignmentsToSlicesConversionFn(gDataset: AlignmentDataset, rdd: RDD[Slice]): SliceDataset

    

19. implicit def AlignmentsToSlicesDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Slice]): SliceDataset

    

20. implicit def AlignmentsToVariantContextConversionFn(gDataset: AlignmentDataset, rdd: RDD[VariantContext]): VariantContextDataset

    

21. implicit def AlignmentsToVariantsConversionFn(gDataset: AlignmentDataset, rdd: RDD[Variant]): VariantDataset

    

22. implicit def AlignmentsToVariantsDatasetConversionFn(gDataset: AlignmentDataset, ds: Dataset[Variant]): VariantDataset

    

23. final def asInstanceOf[T0]: T0

    

    Definition Classes

    Any

24. def clone(): AnyRef

    

    Attributes

    protected[java.lang]

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

25. implicit def coverageToAlignmentsConversionFn(gDataset: CoverageDataset, rdd: RDD[Alignment]): AlignmentDataset

    

26. implicit def coverageToAlignmentsDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Alignment]): AlignmentDataset

    

27. implicit def coverageToCoverageConversionFn(gDataset: CoverageDataset, rdd: RDD[Coverage]): CoverageDataset

    

28. implicit def coverageToFeaturesConversionFn(gDataset: CoverageDataset, rdd: RDD[Feature]): FeatureDataset

    

29. implicit def coverageToFeaturesDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Feature]): FeatureDataset

    

30. implicit def coverageToFragmentsConversionFn(gDataset: CoverageDataset, rdd: RDD[Fragment]): FragmentDataset

    

31. implicit def coverageToFragmentsDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Fragment]): FragmentDataset

    

32. implicit def coverageToGenotypesConversionFn(gDataset: CoverageDataset, rdd: RDD[Genotype]): GenotypeDataset

    

33. implicit def coverageToGenotypesDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Genotype]): GenotypeDataset

    

34. implicit def coverageToReadsConversionFn(gDataset: CoverageDataset, rdd: RDD[Read]): ReadDataset

    

35. implicit def coverageToReadsDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Read]): ReadDataset

    

36. implicit def coverageToSequencesConversionFn(gDataset: CoverageDataset, rdd: RDD[Sequence]): SequenceDataset

    

37. implicit def coverageToSequencesDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Sequence]): SequenceDataset

    

38. implicit def coverageToSlicesConversionFn(gDataset: CoverageDataset, rdd: RDD[Slice]): SliceDataset

    

39. implicit def coverageToSlicesDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Slice]): SliceDataset

    

40. implicit def coverageToVariantContextConversionFn(gDataset: CoverageDataset, rdd: RDD[VariantContext]): VariantContextDataset

    

41. implicit def coverageToVariantsConversionFn(gDataset: CoverageDataset, rdd: RDD[Variant]): VariantDataset

    

42. implicit def coverageToVariantsDatasetConversionFn(gDataset: CoverageDataset, ds: Dataset[Variant]): VariantDataset

    

43. final def eq(arg0: AnyRef): Boolean

    

    Definition Classes

    AnyRef

44. def equals(arg0: Any): Boolean

    

    Definition Classes

    AnyRef → Any

45. implicit def featuresToAlignmentsConversionFn(gDataset: FeatureDataset, rdd: RDD[Alignment]): AlignmentDataset

    

46. implicit def featuresToAlignmentsDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Alignment]): AlignmentDataset

    

47. implicit def featuresToCoverageConversionFn(gDataset: FeatureDataset, rdd: RDD[Coverage]): CoverageDataset

    

48. implicit def featuresToCoverageDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Coverage]): CoverageDataset

    

49. implicit def featuresToFeaturesConversionFn(gDataset: FeatureDataset, rdd: RDD[Feature]): FeatureDataset

    

50. implicit def featuresToFragmentsConversionFn(gDataset: FeatureDataset, rdd: RDD[Fragment]): FragmentDataset

    

51. implicit def featuresToFragmentsDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Fragment]): FragmentDataset

    

52. implicit def featuresToGenotypesConversionFn(gDataset: FeatureDataset, rdd: RDD[Genotype]): GenotypeDataset

    

53. implicit def featuresToGenotypesDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Genotype]): GenotypeDataset

    

54. implicit def featuresToReadsConversionFn(gDataset: FeatureDataset, rdd: RDD[Read]): ReadDataset

    

55. implicit def featuresToReadsDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Read]): ReadDataset

    

56. implicit def featuresToSequencesConversionFn(gDataset: FeatureDataset, rdd: RDD[Sequence]): SequenceDataset

    

57. implicit def featuresToSequencesDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Sequence]): SequenceDataset

    

58. implicit def featuresToSlicesConversionFn(gDataset: FeatureDataset, rdd: RDD[Slice]): SliceDataset

    

59. implicit def featuresToSlicesDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Slice]): SliceDataset

    

60. implicit def featuresToVariantContextConversionFn(gDataset: FeatureDataset, rdd: RDD[VariantContext]): VariantContextDataset

    

61. implicit def featuresToVariantsConversionFn(gDataset: FeatureDataset, rdd: RDD[Variant]): VariantDataset

    

62. implicit def featuresToVariantsDatasetConversionFn(gDataset: FeatureDataset, ds: Dataset[Variant]): VariantDataset

    

63. def finalize(): Unit

    

    Attributes

    protected[java.lang]

    Definition Classes

    AnyRef

    Annotations

    @throws( classOf[java.lang.Throwable] )

64. implicit def fragmentsToAlignmentsConversionFn(gDataset: FragmentDataset, rdd: RDD[Alignment]): AlignmentDataset

    

65. implicit def fragmentsToAlignmentsDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Alignment]): AlignmentDataset

    

66. implicit def fragmentsToCoverageConversionFn(gDataset: FragmentDataset, rdd: RDD[Coverage]): CoverageDataset

    

67. implicit def fragmentsToCoverageDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Coverage]): CoverageDataset

    

68. implicit def fragmentsToFeaturesConversionFn(gDataset: FragmentDataset, rdd: RDD[Feature]): FeatureDataset

    

69. implicit def fragmentsToFeaturesDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Feature]): FeatureDataset

    

70. implicit def fragmentsToFragmentsConversionFn(gDataset: FragmentDataset, rdd: RDD[Fragment]): FragmentDataset

    

71. implicit def fragmentsToGenotypesConversionFn(gDataset: FragmentDataset, rdd: RDD[Genotype]): GenotypeDataset

    

72. implicit def fragmentsToGenotypesDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Genotype]): GenotypeDataset

    

73. implicit def fragmentsToReadsConversionFn(gDataset: FragmentDataset, rdd: RDD[Read]): ReadDataset

    

74. implicit def fragmentsToReadsDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Read]): ReadDataset

    

75. implicit def fragmentsToSequencesConversionFn(gDataset: FragmentDataset, rdd: RDD[Sequence]): SequenceDataset

    

76. implicit def fragmentsToSequencesDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Sequence]): SequenceDataset

    

77. implicit def fragmentsToSlicesConversionFn(gDataset: FragmentDataset, rdd: RDD[Slice]): SliceDataset

    

78. implicit def fragmentsToSlicesDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Slice]): SliceDataset

    

79. implicit def fragmentsToVariantContextConversionFn(gDataset: FragmentDataset, rdd: RDD[VariantContext]): VariantContextDataset

    

80. implicit def fragmentsToVariantsConversionFn(gDataset: FragmentDataset, rdd: RDD[Variant]): VariantDataset

    

81. implicit def fragmentsToVariantsDatasetConversionFn(gDataset: FragmentDataset, ds: Dataset[Variant]): VariantDataset

    

82. implicit def genericToAlignmentsConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Alignment]): AlignmentDataset

    

83. implicit def genericToCoverageConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Coverage]): CoverageDataset

    

84. implicit def genericToFeatureConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Feature]): FeatureDataset

    

85. implicit def genericToFragmentsConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Fragment]): FragmentDataset

    

86. implicit def genericToGenotypesConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Genotype]): GenotypeDataset

    

87. implicit def genericToReadsConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Read]): ReadDataset

    

88. implicit def genericToSequencesConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Sequence]): SequenceDataset

    

89. implicit def genericToSlicesConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Slice]): SliceDataset

    

90. implicit def genericToVariantContextsConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[VariantContext]): VariantContextDataset

    

91. implicit def genericToVariantsConversionFn[Y <: GenericGenomicDataset[_, _]](gDataset: Y, rdd: RDD[Variant]): VariantDataset

    

92. implicit def genotypesToAlignmentsConversionFn(gDataset: GenotypeDataset, rdd: RDD[Alignment]): AlignmentDataset

    

93. implicit def genotypesToAlignmentsDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Alignment]): AlignmentDataset

    

94. implicit def genotypesToCoverageConversionFn(gDataset: GenotypeDataset, rdd: RDD[Coverage]): CoverageDataset

    

95. implicit def genotypesToCoverageDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Coverage]): CoverageDataset

    

96. implicit def genotypesToFeaturesConversionFn(gDataset: GenotypeDataset, rdd: RDD[Feature]): FeatureDataset

    

97. implicit def genotypesToFeaturesDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Feature]): FeatureDataset

    

98. implicit def genotypesToFragmentsConversionFn(gDataset: GenotypeDataset, rdd: RDD[Fragment]): FragmentDataset

    

99. implicit def genotypesToFragmentsDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Fragment]): FragmentDataset

    

100. implicit def genotypesToGenotypesConversionFn(gDataset: GenotypeDataset, rdd: RDD[Genotype]): GenotypeDataset

     

101. implicit def genotypesToReadsConversionFn(gDataset: GenotypeDataset, rdd: RDD[Read]): ReadDataset

     

102. implicit def genotypesToReadsDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Read]): ReadDataset

     

103. implicit def genotypesToSequencesConversionFn(gDataset: GenotypeDataset, rdd: RDD[Sequence]): SequenceDataset

     

104. implicit def genotypesToSequencesDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Sequence]): SequenceDataset

     

105. implicit def genotypesToSlicesConversionFn(gDataset: GenotypeDataset, rdd: RDD[Slice]): SliceDataset

     

106. implicit def genotypesToSlicesDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Slice]): SliceDataset

     

107. implicit def genotypesToVariantContextConversionFn(gDataset: GenotypeDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

108. implicit def genotypesToVariantsConversionFn(gDataset: GenotypeDataset, rdd: RDD[Variant]): VariantDataset

     

109. implicit def genotypesToVariantsDatasetConversionFn(gDataset: GenotypeDataset, ds: Dataset[Variant]): VariantDataset

     

110. final def getClass(): Class[_]

     

     Definition Classes

     AnyRef → Any

111. def hashCode(): Int

     

     Definition Classes

     AnyRef → Any

112. final def isInstanceOf[T0]: Boolean

     

     Definition Classes

     Any

113. final def ne(arg0: AnyRef): Boolean

     

     Definition Classes

     AnyRef

114. final def notify(): Unit

     

     Definition Classes

     AnyRef

115. final def notifyAll(): Unit

     

     Definition Classes

     AnyRef

116. implicit def readsToAlignmentsConversionFn(gDataset: ReadDataset, rdd: RDD[Alignment]): AlignmentDataset

     

117. implicit def readsToAlignmentsDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Alignment]): AlignmentDataset

     

118. implicit def readsToCoverageConversionFn(gDataset: ReadDataset, rdd: RDD[Coverage]): CoverageDataset

     

119. implicit def readsToCoverageDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Coverage]): CoverageDataset

     

120. implicit def readsToFeaturesConversionFn(gDataset: ReadDataset, rdd: RDD[Feature]): FeatureDataset

     

121. implicit def readsToFeaturesDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Feature]): FeatureDataset

     

122. implicit def readsToFragmentsConversionFn(gDataset: ReadDataset, rdd: RDD[Fragment]): FragmentDataset

     

123. implicit def readsToFragmentsDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Fragment]): FragmentDataset

     

124. implicit def readsToGenotypesConversionFn(gDataset: ReadDataset, rdd: RDD[Genotype]): GenotypeDataset

     

125. implicit def readsToGenotypesDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Genotype]): GenotypeDataset

     

126. implicit def readsToReadsConversionFn(gDataset: ReadDataset, rdd: RDD[Read]): ReadDataset

     

127. implicit def readsToSequencesConversionFn(gDataset: ReadDataset, rdd: RDD[Sequence]): SequenceDataset

     

128. implicit def readsToSequencesDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Sequence]): SequenceDataset

     

129. implicit def readsToSlicesConversionFn(gDataset: ReadDataset, rdd: RDD[Slice]): SliceDataset

     

130. implicit def readsToSlicesDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Slice]): SliceDataset

     

131. implicit def readsToVariantContextsConversionFn(gDataset: ReadDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

132. implicit def readsToVariantsConversionFn(gDataset: ReadDataset, rdd: RDD[Variant]): VariantDataset

     

133. implicit def readsToVariantsDatasetConversionFn(gDataset: ReadDataset, ds: Dataset[Variant]): VariantDataset

     

134. implicit def recordToRichRecord(record: Alignment): RichAlignment

     

135. implicit def sequencesToAlignmentsConversionFn(gDataset: SequenceDataset, rdd: RDD[Alignment]): AlignmentDataset

     

136. implicit def sequencesToAlignmentsDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Alignment]): AlignmentDataset

     

137. implicit def sequencesToCoverageConversionFn(gDataset: SequenceDataset, rdd: RDD[Coverage]): CoverageDataset

     

138. implicit def sequencesToCoverageDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Coverage]): CoverageDataset

     

139. implicit def sequencesToFeaturesConversionFn(gDataset: SequenceDataset, rdd: RDD[Feature]): FeatureDataset

     

140. implicit def sequencesToFeaturesDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Feature]): FeatureDataset

     

141. implicit def sequencesToFragmentsConversionFn(gDataset: SequenceDataset, rdd: RDD[Fragment]): FragmentDataset

     

142. implicit def sequencesToFragmentsDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Fragment]): FragmentDataset

     

143. implicit def sequencesToGenotypesConversionFn(gDataset: SequenceDataset, rdd: RDD[Genotype]): GenotypeDataset

     

144. implicit def sequencesToGenotypesDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Genotype]): GenotypeDataset

     

145. implicit def sequencesToReadsConversionFn(gDataset: SequenceDataset, rdd: RDD[Read]): ReadDataset

     

146. implicit def sequencesToReadsDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Read]): ReadDataset

     

147. implicit def sequencesToSequencesConversionFn(gDataset: SequenceDataset, rdd: RDD[Sequence]): SequenceDataset

     

148. implicit def sequencesToSlicesConversionFn(gDataset: SequenceDataset, rdd: RDD[Slice]): SliceDataset

     

149. implicit def sequencesToSlicesDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Slice]): SliceDataset

     

150. implicit def sequencesToVariantContextsConversionFn(gDataset: SequenceDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

151. implicit def sequencesToVariantsConversionFn(gDataset: SequenceDataset, rdd: RDD[Variant]): VariantDataset

     

152. implicit def sequencesToVariantsDatasetConversionFn(gDataset: SequenceDataset, ds: Dataset[Variant]): VariantDataset

     

153. implicit def slicesToAlignmentsConversionFn(gDataset: SliceDataset, rdd: RDD[Alignment]): AlignmentDataset

     

154. implicit def slicesToAlignmentsDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Alignment]): AlignmentDataset

     

155. implicit def slicesToCoverageConversionFn(gDataset: SliceDataset, rdd: RDD[Coverage]): CoverageDataset

     

156. implicit def slicesToCoverageDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Coverage]): CoverageDataset

     

157. implicit def slicesToFeaturesConversionFn(gDataset: SliceDataset, rdd: RDD[Feature]): FeatureDataset

     

158. implicit def slicesToFeaturesDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Feature]): FeatureDataset

     

159. implicit def slicesToFragmentsConversionFn(gDataset: SliceDataset, rdd: RDD[Fragment]): FragmentDataset

     

160. implicit def slicesToFragmentsDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Fragment]): FragmentDataset

     

161. implicit def slicesToGenotypesConversionFn(gDataset: SliceDataset, rdd: RDD[Genotype]): GenotypeDataset

     

162. implicit def slicesToGenotypesDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Genotype]): GenotypeDataset

     

163. implicit def slicesToReadsConversionFn(gDataset: SliceDataset, rdd: RDD[Read]): ReadDataset

     

164. implicit def slicesToReadsDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Read]): ReadDataset

     

165. implicit def slicesToSequencesConversionFn(gDataset: SliceDataset, rdd: RDD[Sequence]): SequenceDataset

     

166. implicit def slicesToSequencesDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Sequence]): SequenceDataset

     

167. implicit def slicesToSlicesConversionFn(gDataset: SliceDataset, rdd: RDD[Slice]): SliceDataset

     

168. implicit def slicesToVariantContextsConversionFn(gDataset: SliceDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

169. implicit def slicesToVariantsConversionFn(gDataset: SliceDataset, rdd: RDD[Variant]): VariantDataset

     

170. implicit def slicesToVariantsDatasetConversionFn(gDataset: SliceDataset, ds: Dataset[Variant]): VariantDataset

     

171. implicit def sparkContextToADAMContext(sc: SparkContext): ADAMContext

     

172. final def synchronized[T0](arg0: ⇒ T0): T0

     

     Definition Classes

     AnyRef

173. def toString(): String

     

     Definition Classes

     AnyRef → Any

174. implicit def variantContextsToAlignmentsConversionFn(gDataset: VariantContextDataset, rdd: RDD[Alignment]): AlignmentDataset

     

175. implicit def variantContextsToCoverageConversionFn(gDataset: VariantContextDataset, rdd: RDD[Coverage]): CoverageDataset

     

176. implicit def variantContextsToFeaturesConversionFn(gDataset: VariantContextDataset, rdd: RDD[Feature]): FeatureDataset

     

177. implicit def variantContextsToFragmentsConversionFn(gDataset: VariantContextDataset, rdd: RDD[Fragment]): FragmentDataset

     

178. implicit def variantContextsToGenotypesConversionFn(gDataset: VariantContextDataset, rdd: RDD[Genotype]): GenotypeDataset

     

179. implicit def variantContextsToReadsConversionFn(gDataset: VariantContextDataset, rdd: RDD[Read]): ReadDataset

     

180. implicit def variantContextsToSequencesConversionFn(gDataset: VariantContextDataset, rdd: RDD[Sequence]): SequenceDataset

     

181. implicit def variantContextsToSlicesConversionFn(gDataset: VariantContextDataset, rdd: RDD[Slice]): SliceDataset

     

182. implicit def variantContextsToVariantContextsConversionFn(gDataset: VariantContextDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

183. implicit def variantContextsToVariantsConversionFn(gDataset: VariantContextDataset, rdd: RDD[Variant]): VariantDataset

     

184. implicit def variantsToAlignmentsConversionFn(gDataset: VariantDataset, rdd: RDD[Alignment]): AlignmentDataset

     

185. implicit def variantsToAlignmentsDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Alignment]): AlignmentDataset

     

186. implicit def variantsToCoverageConversionFn(gDataset: VariantDataset, rdd: RDD[Coverage]): CoverageDataset

     

187. implicit def variantsToCoverageDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Coverage]): CoverageDataset

     

188. implicit def variantsToFeaturesConversionFn(gDataset: VariantDataset, rdd: RDD[Feature]): FeatureDataset

     

189. implicit def variantsToFeaturesDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Feature]): FeatureDataset

     

190. implicit def variantsToFragmentsConversionFn(gDataset: VariantDataset, rdd: RDD[Fragment]): FragmentDataset

     

191. implicit def variantsToFragmentsDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Fragment]): FragmentDataset

     

192. implicit def variantsToGenotypesConversionFn(gDataset: VariantDataset, rdd: RDD[Genotype]): GenotypeDataset

     

193. implicit def variantsToGenotypesDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Genotype]): GenotypeDataset

     

194. implicit def variantsToReadsConversionFn(gDataset: VariantDataset, rdd: RDD[Read]): ReadDataset

     

195. implicit def variantsToReadsDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Read]): ReadDataset

     

196. implicit def variantsToSequencesConversionFn(gDataset: VariantDataset, rdd: RDD[Sequence]): SequenceDataset

     

197. implicit def variantsToSequencesDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Sequence]): SequenceDataset

     

198. implicit def variantsToSlicesConversionFn(gDataset: VariantDataset, rdd: RDD[Slice]): SliceDataset

     

199. implicit def variantsToSlicesDatasetConversionFn(gDataset: VariantDataset, ds: Dataset[Slice]): SliceDataset

     

200. implicit def variantsToVariantContextConversionFn(gDataset: VariantDataset, rdd: RDD[VariantContext]): VariantContextDataset

     

201. implicit def variantsToVariantsConversionFn(gDataset: VariantDataset, rdd: RDD[Variant]): VariantDataset

     

202. final def wait(): Unit

     

     Definition Classes

     AnyRef

     Annotations

     @throws( ... )

203. final def wait(arg0: Long, arg1: Int): Unit

     

     Definition Classes

     AnyRef

     Annotations

     @throws( ... )

204. final def wait(arg0: Long): Unit

     

     Definition Classes

     AnyRef

     Annotations

     @throws( ... )