c
org.bdgenomics.adam.rdd.fragment
InterleavedFASTQInFormatter
Companion object InterleavedFASTQInFormatter
class InterleavedFASTQInFormatter extends InFormatter[Fragment, Fragment, FragmentDataset, InterleavedFASTQInFormatter] with Logging
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- InterleavedFASTQInFormatter
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companion: InterleavedFASTQInFormatter.type
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- InterleavedFASTQInFormatter → InFormatter
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def
write(os: OutputStream, iter: Iterator[Fragment]): Unit
Writes alignments to an output stream in interleaved FASTQ format.
Writes alignments to an output stream in interleaved FASTQ format.
- os
An OutputStream connected to a process we are piping to.
- iter
An iterator of records to write.
- Definition Classes
- InterleavedFASTQInFormatter → InFormatter