org.bdgenomics.adam.projections

GenotypeField

object GenotypeField extends FieldEnumeration

Enumeration of Genotype field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. GenotypeField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Type Members

  1. class SchemaVal extends Val with FieldValue

    Definition Classes
    FieldEnumeration

  2. class Val extends Value with Serializable

    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( -3501153230598116017L )

  3. abstract class Value extends Ordered[Value] with Serializable

    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( 7091335633555234129L )

  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def SchemaValue: SchemaVal

    Attributes
    protected
    Definition Classes
    FieldEnumeration

  7. final def Value(i: Int, name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  8. final def Value(name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  9. final def Value(i: Int): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  10. final def Value: Value

    Attributes
    protected
    Definition Classes
    Enumeration

  11. val alleles: SchemaVal

  12. val alternateReadDepth: SchemaVal

  13. final def apply(x: Int): Value

    Definition Classes
    Enumeration

  14. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  15. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  16. val contigName: SchemaVal

  17. val end: SchemaVal

  18. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  19. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  20. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  21. val genotypeLikelihoods: SchemaVal

  22. val genotypeQuality: SchemaVal

  23. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  24. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  25. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  26. val isPhased: SchemaVal

  27. final def maxId: Int

    Definition Classes
    Enumeration

  28. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  29. var nextId: Int

    Attributes
    protected
    Definition Classes
    Enumeration

  30. var nextName: Iterator[String]

    Attributes
    protected
    Definition Classes
    Enumeration

  31. final def notify(): Unit

    Definition Classes
    AnyRef

  32. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  33. val phaseQuality: SchemaVal

  34. val phaseSetId: SchemaVal

  35. val processingDescription: SchemaVal

  36. val readDepth: SchemaVal

  37. def readResolve(): AnyRef

    Attributes
    protected
    Definition Classes
    Enumeration

  38. val recordSchema: Schema

    Definition Classes
    FieldEnumeration

  39. val referenceReadDepth: SchemaVal

  40. val sampleDescription: SchemaVal

  41. val sampleId: SchemaVal

  42. val splitFromMultiAllelic: SchemaVal

  43. val start: SchemaVal

  44. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  45. def toString(): String

    Definition Classes
    Enumeration → AnyRef → Any

  46. def values: ValueSet

    Definition Classes
    Enumeration

  47. val variant: SchemaVal

  48. val variantCallingAnnotations: SchemaVal

  49. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  50. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  51. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  52. final def withName(s: String): Value

    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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