org.bdgenomics.qc.cli

QCMain

object QCMain extends Logging

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Type Members

  1. case class CommandGroup(name: String, commands: List[BDGCommandCompanion]) extends Product with Serializable

  2. class InitArgs extends Args4jBase with ParquetArgs

Value Members

  1. final def !=(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  5. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  6. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  7. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  8. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  9. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  10. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  11. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  12. def isTraceEnabled(): Boolean

    Attributes
    protected
    Definition Classes
    Logging
  13. def log: Logger

    Attributes
    protected
    Definition Classes
    Logging
  14. def logDebug(msg: ⇒ String, throwable: Throwable): Unit

    Attributes
    protected
    Definition Classes
    Logging
  15. def logDebug(msg: ⇒ String): Unit

    Attributes
    protected
    Definition Classes
    Logging
  16. def logError(msg: ⇒ String, throwable: Throwable): Unit

    Attributes
    protected
    Definition Classes
    Logging
  17. def logError(msg: ⇒ String): Unit

    Attributes
    protected
    Definition Classes
    Logging
  18. def logInfo(msg: ⇒ String, throwable: Throwable): Unit

    Attributes
    protected
    Definition Classes
    Logging
  19. def logInfo(msg: ⇒ String): Unit

    Attributes
    protected
    Definition Classes
    Logging
  20. def logName: String

    Attributes
    protected
    Definition Classes
    Logging
  21. def logTrace(msg: ⇒ String, throwable: Throwable): Unit

    Attributes
    protected
    Definition Classes
    Logging
  22. def logTrace(msg: ⇒ String): Unit

    Attributes
    protected
    Definition Classes
    Logging
  23. def logWarning(msg: ⇒ String, throwable: Throwable): Unit

    Attributes
    protected
    Definition Classes
    Logging
  24. def logWarning(msg: ⇒ String): Unit

    Attributes
    protected
    Definition Classes
    Logging
  25. def main(args: Array[String]): Unit

  26. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  27. final def notify(): Unit

    Definition Classes
    AnyRef
  28. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  29. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  30. def toString(): String

    Definition Classes
    AnyRef → Any
  31. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  32. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  33. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Logging

Inherited from AnyRef

Inherited from Any

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