org.bdgenomics.quinine.metrics

LongComparisons

abstract class LongComparisons extends BucketComparisons[Long]

Linear Supertypes
BucketComparisons[Long], AnyRef, Any
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Visibility
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Instance Constructors

  1. new LongComparisons()

Abstract Value Members

  1. abstract def description: String

    Description of the comparison, to be used by the "list comparisons" CLI option.

    Description of the comparison, to be used by the "list comparisons" CLI option.

    Definition Classes
    BucketComparisons
  2. abstract def matchedByName(bucket1: ReadBucket, bucket2: ReadBucket): Seq[Long]

    The records have been matched by their names, but the rest may be mismatched.

    The records have been matched by their names, but the rest may be mismatched.

    Definition Classes
    BucketComparisons
  3. abstract def name: String

    Name of the comparison.

    Name of the comparison. Should be identifiable, and able to be written on the command line.

    Definition Classes
    BucketComparisons
  4. abstract def schemas: Seq[FieldValue]

    All of the schemas which this comparison uses.

    All of the schemas which this comparison uses.

    Definition Classes
    BucketComparisons

Concrete Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any
  3. final def ##(): Int

    Definition Classes
    AnyRef → Any
  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any
  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  7. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. def createFilter(filterDef: String): ComparisonsFilter[Long]

    parses and creates a filter for this BucketComparisons value, conforming to the definition in the filterDef argument.

    parses and creates a filter for this BucketComparisons value, conforming to the definition in the filterDef argument.

    filterDef

    a filter definition string, e.g. ">3"

    returns

    A ComparisonsFilter value that performs the indicated comparison on the output of 'this' (i.e. T values)

    Definition Classes
    LongComparisonsBucketComparisons
  9. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  10. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  11. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  12. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  13. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  14. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  15. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  16. final def notify(): Unit

    Definition Classes
    AnyRef
  17. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  18. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  19. def toString(): String

    Definition Classes
    AnyRef → Any
  20. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  21. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  22. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from BucketComparisons[Long]

Inherited from AnyRef

Inherited from Any

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