org.bdgenomics.quinine.metrics.targeted

PanelStats

case class PanelStats extends Product with Serializable

A convenience class that holds the computed statistics.

Linear Supertypes
Serializable, Serializable, Product, Equals, AnyRef, Any
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. PanelStats
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. AnyRef
  7. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any
  3. final def ##(): Int

    Definition Classes
    AnyRef → Any
  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any
  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  7. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  9. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  10. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  11. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  12. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  13. final def notify(): Unit

    Definition Classes
    AnyRef
  14. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  15. val panelBaseStats: PanelBases

  16. val panelName: String

    The name of this targeted sequencing panel.

  17. val readStats: ReadStats

    General statistics about the reads aligned to this panel.

  18. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  19. val targetCoverageStats: CoverageStats

  20. def toString(): String

    Definition Classes
    PanelStats → AnyRef → Any
  21. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  22. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  23. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

Ungrouped