intervalarray

Type Members

1. trait Interval[T <: Interval[T]] extends Comparable[T]

   

   An interval is a 2-dimensional 0-based coordinate consisting of a closed start value and open end value.

   An interval is a 2-dimensional 0-based coordinate consisting of a closed start value and open end value. Each 2-dimensional coordinate has a defined width. This can be used to express a region of a genome, a transcript, a gene, etc.

   T

   Recursive type extending Interval. Used for return type of functions overlap() and compareTo()

2. class IntervalArray[K <: Interval[K], T] extends Serializable

   

   Originally, a IntervalArray was a collection of trees.

   Originally, a IntervalArray was a collection of trees. Alas, we have no trees anymore. I blame global warming.

3. class IntervalArraySerializer[K <: Interval[K], T] extends Serializer[IntervalArray[K, T]]