org.bdgenomics.utils.metrics.aggregators

UniqueAggregator

class UniqueAggregator[T] extends Aggregator[T, UniqueWritable[T]]

Linear Supertypes
Aggregator[T, UniqueWritable[T]], Serializable, Serializable, AnyRef, Any
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  1. UniqueAggregator
  2. Aggregator
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Instance Constructors

  1. new UniqueAggregator()

Value Members

  1. final def !=(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  5. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  6. def combine(first: UniqueWritable[T], second: UniqueWritable[T]): UniqueWritable[T]

    Aggregation function to combine the result of a computation with prior results.

    Aggregation function to combine the result of a computation with prior results.

    first

    The first aggregation

    second

    The second aggregation

    returns

    An aggregation combining the values in the first and second aggregations.

    Definition Classes
    UniqueAggregatorAggregator
  7. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  8. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  9. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  10. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  11. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  12. def initialValue: UniqueWritable[T]

    An initial value for the aggregation

    An initial value for the aggregation

    returns

    An initial value for the aggregation

    Definition Classes
    UniqueAggregatorAggregator
  13. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  14. def lift(value: Seq[T]): UniqueWritable[T]

    Aggregates a single sequence of values (which are produced by a single record-pair)

    Aggregates a single sequence of values (which are produced by a single record-pair)

    value

    The Seq[SingleType] produced by a Comparisons invocation on a ReadBucket

    returns

    The aggregation of that sequence.

    Definition Classes
    UniqueAggregatorAggregator
  15. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  16. final def notify(): Unit

    Definition Classes
    AnyRef
  17. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  18. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  19. def toString(): String

    Definition Classes
    AnyRef → Any
  20. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  21. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  22. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Aggregator[T, UniqueWritable[T]]

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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