Class/Object

org.bdgenomics.utils.minhash

MinHashSignature

Related Docs: object MinHashSignature | package minhash

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case class MinHashSignature extends Product with Serializable

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Serializable, Serializable, Product, Equals, AnyRef, Any
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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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  6. final def eq(arg0: AnyRef): Boolean

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  7. def finalize(): Unit

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  8. final def getClass(): Class[_]

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  9. val hashArray: Array[Int]

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  10. final def isInstanceOf[T0]: Boolean

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  11. final def ne(arg0: AnyRef): Boolean

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  12. final def notify(): Unit

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  13. final def notifyAll(): Unit

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  14. def similarity(other: MinHashSignature): Double

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    Computes the estimated Jaccard similarity of two objects that have MinHash signatures.

    Computes the estimated Jaccard similarity of two objects that have MinHash signatures.

    other

    Another signature to similarity against.

    returns

    Returns the estimated Jaccard similarity of two signatures, which is defined as the number of elements in the signature that agree over the total length of the signature.

    Note

    This signature must be the same length as the signature we are comparing to. We do not perform this check; we delegate this check to the function caller.

  15. final def synchronized[T0](arg0: ⇒ T0): T0

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  16. def toVector: Vector

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    Goes from hash array to an MLLib vector.

    Goes from hash array to an MLLib vector.

    returns

    A dense vector that can be used in MLLib.

  17. final def wait(): Unit

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  18. final def wait(arg0: Long, arg1: Int): Unit

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  19. final def wait(arg0: Long): Unit

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