-
FieldDescriptionyou should use
GATKVariantContextUtils.noCallAlleles(int)
instead. It indicates the presence of a hardcoded diploid assumption which is bad.It is no longer necessary to create locs file symlinks.
-
MethodDescriptionUse the varargs version. This no longer returns a warning string..Use the varargs version. This no longer returns a warning string..Use the varargs version. This no longer returns a warning string..Use the varargs version. This no longer returns a warning string..
-
Enum ConstantDescription- but used in existing extended manifest files.- but used in existing extended manifest files.- but used in existing extended manifest files.- but used in existing extended manifest files.- but used in existing extended manifest files.- but used in existing extended manifest files.
CrosscheckFingerprints
instead.