AssemblyExporter

Value Members

1. final def !=(arg0: Any): Boolean

   

   Definition Classes

   AnyRef → Any

2. final def ##(): Int

   

   Definition Classes

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3. final def ==(arg0: Any): Boolean

   

   Definition Classes

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4. val EERLUT: Map[Int, String]

   

5. final def asInstanceOf[T0]: T0

   

   Definition Classes

   Any

6. def clone(): AnyRef

   

   Attributes

   protected[java.lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( ... )

7. def createController(eer: EntityEventRepresentation): String

   

8. def createDestination(eer: EntityEventRepresentation): String

   

9. def createInput(eer: EntityEventRepresentation, mods: String = ""): String

   

10. def createOutput(eer: EntityEventRepresentation, mods: String = ""): String

    

11. def createSimpleEntityText(entity: SimpleEntity): String

    

    Create text representation of SimpleEntity

    Create text representation of SimpleEntity

    entity

    a SimpleEntity

    returns

    a String representing entity and its modifications, mutations, etc

12. def createSource(eer: EntityEventRepresentation): String

    

13. def createTranslocationArgument(eer: EntityEventRepresentation, name: String): String

    

14. val distinctEERS: Set[EER]

    

15. final def eq(arg0: AnyRef): Boolean

    

    Definition Classes

    AnyRef

16. def equals(arg0: Any): Boolean

    

    Definition Classes

    AnyRef → Any

17. def finalize(): Unit

    

    Attributes

    protected[java.lang]

    Definition Classes

    AnyRef

    Annotations

    @throws( classOf[java.lang.Throwable] )

18. final def getClass(): Class[_]

    

    Definition Classes

    AnyRef → Any

19. def getRows: Seq[AssemblyRow]

    

20. def getText(entity: SimpleEntity): String

    

21. val grounding2Text: Map[GroundingID, String]

    

22. def hashCode(): Int

    

    Definition Classes

    AnyRef → Any

23. final def isInstanceOf[T0]: Boolean

    

    Definition Classes

    Any

24. lazy val logger: Logger

    

    Attributes

    protected

    Definition Classes

    LazyLogging

25. val manager: AssemblyManager

    

26. def mkEventID(eer: EntityEventRepresentation): String

    

27. final def ne(arg0: AnyRef): Boolean

    

    Definition Classes

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28. final def notify(): Unit

    

    Definition Classes

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29. final def notifyAll(): Unit

    

    Definition Classes

    AnyRef

30. def precededBy(eer: EntityEventRepresentation): Set[String]

    

    Converts predecessors of Event to Event IDs

    Converts predecessors of Event to Event IDs

    eer

    an EntityEventRepresentation

    returns

    a Set of String representing Event IDs of eer's predecessors

31. def reportError(ce: ComplexEvent, c: EntityEventRepresentation): String

    

    for debugging purposes

32. def rowsToString(cols: Seq[String], sep: String = AssemblyExporter.SEP, rowFilter: (Seq[AssemblyRow]) ⇒ Seq[AssemblyRow]): String

    

33. def rowsWithOutputIDProblems(rows: Seq[AssemblyRow]): Seq[AssemblyRow]

    

    for debugging purposes

34. def rowsWithPrecededByIDProblems(rows: Seq[AssemblyRow]): Seq[AssemblyRow]

    

    for debugging purposes

35. final def synchronized[T0](arg0: ⇒ T0): T0

    

    Definition Classes

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36. def toString(): String

    

    Definition Classes

    AnyRef → Any

37. final def wait(): Unit

    

    Definition Classes

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    Annotations

    @throws( ... )

38. final def wait(arg0: Long, arg1: Int): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

39. final def wait(arg0: Long): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

40. def writeRows(f: File, cols: Seq[String], sep: String = AssemblyExporter.SEP, rowFilter: (Seq[AssemblyRow]) ⇒ Seq[AssemblyRow]): Unit