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org.clulab.reach.export

OutputDegrader

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object OutputDegrader

Degrade internal representations for output

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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. final def asInstanceOf[T0]: T0

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  5. def clone(): AnyRef

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  6. final def eq(arg0: AnyRef): Boolean

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  7. def equals(arg0: Any): Boolean

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  8. def finalize(): Unit

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  9. def flattenControlled(m: Mention, negated: Boolean = false): BioMention

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    Recover controlled from a potentially nested structure by recursively converting
    an Event to an Entity with the appropriate modifications representing its state.

    Recover controlled from a potentially nested structure by recursively converting
    an Event to an Entity with the appropriate modifications representing its state.
    SimpleEvent -> theme + PTM
    Binding -> Complex (treated as an Entity)
    ComplexEvent -> recursive call on controlled

  10. def flattenController(m: Mention, negated: Boolean = false): BioMention

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    Recover controller from a potentially nested structure by recursively converting
    an Event to an Entity with the appropriate modifications representing its state.

    Recover controller from a potentially nested structure by recursively converting
    an Event to an Entity with the appropriate modifications representing its state.
    SimpleEvent -> theme + PTM
    Binding -> Complex (treated as an Entity)
    ComplexEvent -> recursive call on controller

  11. def flattenMention(m: Mention): BioMention

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  12. def flattenMentions(mentions: Seq[Mention]): Seq[BioMention]

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    Flattens nested controllers TODO: Should this also flatten controlleds?

  13. final def getClass(): Class[_]

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  14. def hashCode(): Int

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  15. final def isInstanceOf[T0]: Boolean

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  16. def isValidMention(m: Mention): Boolean

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  17. final def ne(arg0: AnyRef): Boolean

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  18. final def notify(): Unit

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  19. final def notifyAll(): Unit

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  20. def prepareForOutput(mentions: Seq[Mention]): Seq[CorefMention]

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    Prepare mentions for output 1.

    Prepare mentions for output 1. "Flatten" mentions (flatten nested controllers) 2. Remove duplicates 3. validate

  21. final def synchronized[T0](arg0: ⇒ T0): T0

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  22. def toString(): String

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  23. def validateMentions(mns: Seq[Mention]): Seq[Mention]

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  24. final def wait(): Unit

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  25. final def wait(arg0: Long, arg1: Int): Unit

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  26. final def wait(arg0: Long): Unit

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