Class

org.clulab.reach.grounding

IMKBMetaInfo

Related Doc: package grounding

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class IMKBMetaInfo extends KBMetaInfo with Serializable

Class holding meta-information for an in-memory knowledge base instance. Written by: Tom Hicks. 10/25/2015. Last Modified: Make this class serializable.

Linear Supertypes
KBMetaInfo, Serializable, Serializable, AnyRef, Any
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Inherited
  1. IMKBMetaInfo
  2. KBMetaInfo
  3. Serializable
  4. Serializable
  5. AnyRef
  6. Any
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new IMKBMetaInfo(kbFilename: Option[String] = None, baseURI: String = "", resourceId: String = "", namespace: String = DefaultNamespace, hasSpeciesInfo: Boolean = false, isFamilyKB: Boolean = false, isProteinKB: Boolean = false)

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  4. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any

  5. val baseURI: String

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  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  7. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  8. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  9. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  10. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  11. val hasSpeciesInfo: Boolean

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    Definition Classes
    KBMetaInfo

  12. def hashCode(): Int

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    Definition Classes
    AnyRef → Any

  13. val isFamilyKB: Boolean

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    Definition Classes
    KBMetaInfo

  14. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  15. val isProteinKB: Boolean

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    Definition Classes
    KBMetaInfo

  16. val kbFilename: Option[String]

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  17. val namespace: String

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    Definition Classes
    KBMetaInfo

  18. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  19. final def notify(): Unit

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    Definition Classes
    AnyRef

  20. final def notifyAll(): Unit

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    Definition Classes
    AnyRef

  21. def referenceURI(id: String): String

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    Using the given ID string, generate a URI which references an entry in an external knowledge base: (e.g., given "P2345" => "http://identifiers.org/uniprot/P2345").

  22. val resourceId: String

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  23. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef

  24. def toString(): String

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    Override method to provide logging/debugging printout.

    Override method to provide logging/debugging printout.

    Definition Classes
    IMKBMetaInfo → KBMetaInfo → AnyRef → Any

  25. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  26. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  27. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from KBMetaInfo

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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